| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0356 |
|---|
| Symbol | murD |
|---|
| ID | 4239832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 362739 |
|---|
| End bp | 364049 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638103899 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_718566 |
|---|
| Protein GI | 113460502 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.356798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATC AATATCAAAA CAAAAATATC TGCGTAGTCG GATTAGGTAA AACAGGATTG
TCTTGCGTTG ATTTCTTGTT ACGGCAGCAA GCAAATGTAC GTGTCATTGA TACTCGTCAA
CAACCGACGG GAGCAGAAAA ATTACCTGAA AATGTCCCCT TACATACAGG AAGCTTAAAC
CAACAATGGC TACTTGAAGC TGATCTCATT GTGATTAGCC CTGGGCTTTC TGTTAAAACA
CTTGAAATTC AGACCGCACT TCAGGCCGGT GTAGAGGTTG TCGGTGATAT TGAATTATTT
TGTCGTCACG CCAATAAGCC AATTATTGCT ATTACAGGCT CAAATGGTAA GAGTACCGTG
ACTACATTGG TCAGTGAAAT GGCGAAAGAG GATGGCTTAA AAGTTGGAAT GGGGGGAAAT
ATTGGTATTC CTGCTCTTGA GTTATTGCAA CAAGATTATG ATATCTATGT TTTAGAGCTA
TCAAGTTTTC AACTGGAGAC GACTTATAGT TTGAAAGCGA CAGCCGCAAC GATTTTAAAT
ATTAGTGAAG ATCATATGGA TCGTTATCTC GATATTGAAG ATTATCGCCA AGCCAAATTG
AGAATTTATG AAAATTGTCA ACGTGCGGTA ATAAATGCCG AAGATGTATT AACAACAACG
GAAGATTTAA AGTCTCCAAT TACTTTTGGA GAAAGTCAGG CAGATTATTG GCTAAAAACG
GAAAATGGCA AGCAATATTT AATGGCAAAA GAGCGGTTAA TTTTACCTTG TGATGAAATG
AAATTGGTAG GTCGTCATAA TTATATGAAT GCGTTGGCGG CCAGTGCGTT GGTTCAGGCT
GTCGACATAA GTTTTACTGC AATTCGGACC GCACTTCGTA AATTTACCGG TTTAGCTCAT
CGCTTTCAGT TAGCATATCA GAAAGATGAT GTACGTTGGA TTAATGATTC GAAGGCAACC
AATGTTGGAA GTACAGTTGC TGCACTGACC GGTTTGTATG TAGCTAATAA ATTACATTTA
TTGTTGGGGG GGGATGGTAA ATCCGCAGAT TTTTCGGAAT TGGCAACATT AATTAATCAA
CCCCATATTT ATTGCTATTG TTTTGGGCAA GATGGTAAAG AACTTGCCGC ACTATCAGTG
CAAAGTCAGT TATTTGATAC GATGGAACAG GCAATAGAAG CTATTCGTCC GAATTTACAG
CAAGGTGATA TGGTGCTTTT ATCACCGGCT TGTGCAAGTT TGGATCAATT TAAATCCTTT
GAACATCGAG GTGATGTTTT TAGTGATTTA GCGAAGTTGG CACAGGGTTA A
|
|---|
| Protein sequence | MTNQYQNKNI CVVGLGKTGL SCVDFLLRQQ ANVRVIDTRQ QPTGAEKLPE NVPLHTGSLN
QQWLLEADLI VISPGLSVKT LEIQTALQAG VEVVGDIELF CRHANKPIIA ITGSNGKSTV
TTLVSEMAKE DGLKVGMGGN IGIPALELLQ QDYDIYVLEL SSFQLETTYS LKATAATILN
ISEDHMDRYL DIEDYRQAKL RIYENCQRAV INAEDVLTTT EDLKSPITFG ESQADYWLKT
ENGKQYLMAK ERLILPCDEM KLVGRHNYMN ALAASALVQA VDISFTAIRT ALRKFTGLAH
RFQLAYQKDD VRWINDSKAT NVGSTVAALT GLYVANKLHL LLGGDGKSAD FSELATLINQ
PHIYCYCFGQ DGKELAALSV QSQLFDTMEQ AIEAIRPNLQ QGDMVLLSPA CASLDQFKSF
EHRGDVFSDL AKLAQG
|
|---|
| |