Gene HS_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0330 
Symbol 
ID4239803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp326447 
End bp327109 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID638103870 
Productintegral membrane protein 
Protein accessionYP_718538 
Protein GI113460476 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000128049 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCTC GTTTTATTGT TGATACTAAA GAAGAATCGG TACTGGCAAC AAATAAGGTT 
TTACGTAACA CCTACTTTTT ATTAGCATTG ACATTGGCTT TTTCTTCTGT TGTCGCCTTC 
AGTGCAATGC AATTAAACCT CCCTCCACTT CATTTCGGTG TCATGTTGGT AGGTTTTTAT 
GGATTATTAT TCCTCAATAA TATGTTAGCA AACAGTGCTT GGGGACTTTT ATCTACATTC 
GCATTAACAG GATTATTAGG CTATTCTTTA GGTCCTATTT TAAGCTATTA TGTTGGCTCA 
GGATTAGGTG ATTTGGTTGT TCTTGCTCTA GCCGGAACTG CAAGTGTATT TTTTACATGC 
TCGGCCTATG TGCTAACAAC AAAAAAAGAT ATGTCATTCT TATCCGGCAT GATGCTTGCT 
CTCTTTATCG TACTGGTTAT AGGCATGATA GCAAGTTTCT TCTTTAATAT GAGTGGCTTT 
CACATCGTAT TTAGTTCGTT ATTTATCGTT TTCTCAACTA TGGCTATTTT ATATGAAACC 
AGCAATATCA TTCATGGGGG AGAAACTAAT TATATTAGAG CTACGGTTAG TTTGTATGTT 
TCACTTTACA ATCTTTTTGT CAGCTTGCTC AATTTACTAG GTATTTTCAA CCGTGATGAA 
TAA
 
Protein sequence
MQSRFIVDTK EESVLATNKV LRNTYFLLAL TLAFSSVVAF SAMQLNLPPL HFGVMLVGFY 
GLLFLNNMLA NSAWGLLSTF ALTGLLGYSL GPILSYYVGS GLGDLVVLAL AGTASVFFTC 
SAYVLTTKKD MSFLSGMMLA LFIVLVIGMI ASFFFNMSGF HIVFSSLFIV FSTMAILYET 
SNIIHGGETN YIRATVSLYV SLYNLFVSLL NLLGIFNRDE