Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0321 |
Symbol | mrdA |
ID | 4239794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 318760 |
End bp | 320673 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638103861 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_718529 |
Protein GI | 113460467 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.277376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA AAAAATTACT CTCTCAACCT CTACAAACAC CGATCCGAGA TAAAAAGGCG GAGAGAAACC TTTTTGCTCG TCGTGCTCTT ATCGCCTTTC TAGGTGTATT GGGTTTATCA GCACTTTTAT TTACCAATTT GTATTATTTA CAAATTGTCA ATTACGAAAC TTACCAGACA AGATCTAACG GAAATCGAAT TAAATTACTT CCTTTGCCAC CGACTCGAGG GCTAATTTAC GACCGCTACG GCAAATTATT AGCGGAAAAT ATTACCTTTC TCGGCTTATA TATTGTGCCG GAAAAAGTTG AGGATTTAAA CCGCACTTTT GAAGAGTTAC GCTATATCGT TGGTTTAAAT GATGACGATA TTGAGAACTT TAAAAAGGAA CGTCGTCGCT CATCCCGATA TATGCCAATT CTCCTTAAAG GAGATTTGAG CGAAGAACAA ATCGCACGCT TTGCAGTAAA CCAATATCAC TATCCCAGCC TCGATATTAG GCCTTACTTT AAACGCCACT ATTTGTATGG TGAGCCGTTG ACTCATATTC TAGGGTATGT CGCTAAAATC AATGAAAAAG ATGTAGAGCG TTTAAAGAAA AATGAAAAAT ACGCCAACTA CGCCGGCACT CATGATATTG GCAAGCTCGG TATTGAACGT TACTATGAAG ATGACTTACA TGGCAAAGTA GGATTTGAAG AAGTTGAAGT GAATAATAGA GGTAAGGTTA TTCGCAAACT AAGGGAACAG CCTGCTATTG CCGGAAAAAG TATTCACTTA ACGATTGATT TAGAATTACA ACGTTATATC GCAAATTTAT TGGGCAATCT TCGTGCAGCA GTTGTAGTGT TAGATCCTAA AGATAGCGGT ATTTTAGCAA TGGTTTCTAC CCCGAGCTAT GATAACAATC TTTTTGTTGG CGGTATTTCA AGTGCGGATT ACAAGCAATT ACTGACAGAT CCTAATCGCC CTTTGTATAG CCGTGTTACT CAGGGTGCTT ATCCACCAGC TTCAACGATA AAACCTTTCG TTGCTATCGC TGGCTTGCAA GAAAATTTAA TTACCACAAA TACTACGATA TTTGACCCAG GATATTGGAT TTTACCTAAT ACCACCAAAC GTTTTAGAGA TTGGAAAAAA TCAGGGCACG GCTACACCGA TTTGAATAAA GCTATAGTAG AATCTTCAGA TACTTATTTT TATCAACTTG CTTACGACAT GGGCATTAGC CGTTTATCTC AGTGGATGAA ACGCTTTGGT TTTGGTATAC CAACAGGTAT TGATATTCAA GAAGAAACCG CCGCACTTAT GCCAAGTCGG GAATGGAAAC AAAAACGCTA CAAACGACCT TGGGTTCAGG GTGATACTAT TTCTGTAGGA ATTGGTCAAG GTTATTGGAC AGCCACCCCA TTACAAGTTG CCAAAGCAAC TGCAGTTTTA GTTAATAATG GCAAGGTTAA TACTCCGCAC TTAATGAAAG CAGTTGAAGG GTCAGAAATG CAACCCTATC AAGATCCTCG TCTTTACGAA GATATTACTG AACCTCAAGC GGTATTTTGG GAAACGATAA AACAAAGCAT GTATAATGTA ATACACGCAC CGAATGGTAC AGGACGTAAA TCTTTTATTG ATGTCAGTTA TCCTGTTGCA GGAAAATCAG GAACGGCTCA AGTTTTCAGC CTGAAAGAAA ATCAAACTTA CAATGCAAAC GAACTTGATA ATAAATTGCA CGATCATGCT TGGTTCATCG GATATGCACC TTATGACAAT CCTAAAATGG TTGTTGTTGT TATTTTGGAA AATGCCGGTG GTGGTAGCAG TAAGGCAGGA CCTGTTGTTC GAAAAATTAT GGATTATTAT TTAAATATCC GTTTGCCACA AGTACAATTA CAAAATGAAA AAGGAAAAAG TTGA
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Protein sequence | MNLKKLLSQP LQTPIRDKKA ERNLFARRAL IAFLGVLGLS ALLFTNLYYL QIVNYETYQT RSNGNRIKLL PLPPTRGLIY DRYGKLLAEN ITFLGLYIVP EKVEDLNRTF EELRYIVGLN DDDIENFKKE RRRSSRYMPI LLKGDLSEEQ IARFAVNQYH YPSLDIRPYF KRHYLYGEPL THILGYVAKI NEKDVERLKK NEKYANYAGT HDIGKLGIER YYEDDLHGKV GFEEVEVNNR GKVIRKLREQ PAIAGKSIHL TIDLELQRYI ANLLGNLRAA VVVLDPKDSG ILAMVSTPSY DNNLFVGGIS SADYKQLLTD PNRPLYSRVT QGAYPPASTI KPFVAIAGLQ ENLITTNTTI FDPGYWILPN TTKRFRDWKK SGHGYTDLNK AIVESSDTYF YQLAYDMGIS RLSQWMKRFG FGIPTGIDIQ EETAALMPSR EWKQKRYKRP WVQGDTISVG IGQGYWTATP LQVAKATAVL VNNGKVNTPH LMKAVEGSEM QPYQDPRLYE DITEPQAVFW ETIKQSMYNV IHAPNGTGRK SFIDVSYPVA GKSGTAQVFS LKENQTYNAN ELDNKLHDHA WFIGYAPYDN PKMVVVVILE NAGGGSSKAG PVVRKIMDYY LNIRLPQVQL QNEKGKS
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