Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0316 |
Symbol | lipB |
ID | 4239789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 314750 |
End bp | 315406 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638103856 |
Product | lipoate-protein ligase B |
Protein accession | YP_718524 |
Protein GI | 113460462 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.152256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA CTACTCTTAT TATACGCCAA CTTGGAATCC AAGATTATCA ACAAGTTTGG CAACAAATGC GAGAATTTAC TGATACTCGA AATGCGCTAA CACCTGATGA AATTTGGTTA GTTCAACATC CGGCTGTTTT TACACAAGGA CAAGCAGGTA AACCTGAACA TTTGCTCAAT CCAACCGATA TTCCTGTAGT ACAATCCGAT CGTGGGGGAC AAATTACCTA TCATGGCTTA GGACAACAAA TTATGTATGT ACTGATTGAT ATTAAGCGTC ACAAAGCAAA CGGCAGTGAA CTTAATGTTC GTCAATTAGT TACCGCTCTT GAGCAATCAG TGGTTAGCAC ACTGGCTGAT TATGGTATTA AAAGTTATCC GAAAGCTGAT GCCCCCGGTG TATATGTAAA TGAACAAAAA ATTTGTTCTC TTGGTTTACG TATTCGTAAA GGCTGCTCTT TCCATGGTTT AGCCTTAAAT ATCAACATGG ATTTATCGCC ATTTAGACAA ATCAATCCTT GTGGCTATAT AGGCTTAGAA ATGTGCCAAA TGGCAGATTT TATACCCACT GAACAAGCTC AATGTGATAA AGTTGCACCC AAATTAGTTA CACACTTTAC GCAATTATTG GGCTATAATG ATGTAACAAC TTATTAA
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Protein sequence | MTDTTLIIRQ LGIQDYQQVW QQMREFTDTR NALTPDEIWL VQHPAVFTQG QAGKPEHLLN PTDIPVVQSD RGGQITYHGL GQQIMYVLID IKRHKANGSE LNVRQLVTAL EQSVVSTLAD YGIKSYPKAD APGVYVNEQK ICSLGLRIRK GCSFHGLALN INMDLSPFRQ INPCGYIGLE MCQMADFIPT EQAQCDKVAP KLVTHFTQLL GYNDVTTY
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