Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0313 |
Symbol | |
ID | 4239786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 312490 |
End bp | 313248 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638103853 |
Product | TPR repeat-containing protein |
Protein accession | YP_718521 |
Protein GI | 113460459 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.526725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTCA AAAAATTCCT ACTTATCGCC TTGCTCTCTT TCGGTATTGC CCAATCTGCA CTTGCCGAAA CCAATAGCGA AAAATTTGAT CGTGCTTACC AATTTATTGA ACAACAAAAT TATTCTGCCG CTTTTCCCTT ATTCAAACAA CTGGCTGAAC AGGGATTGGC AAATGCTCAA TACAATCTCG GCGTGATGTA TAAAAAAGGA CGAGGTGTTG CCCAAAGCGA TACACAAGCC GTCTATTGGT GGAAAAAAGC TGCCGAACAG GGATTGGCAG ATGCTCAATA CAATCTCGGC TTGATGTATA AAAAAGGACG AGGTGTTGCC CAAAGCGATA CACAAGCCAT CTATTGGTAC ACAAAAGCCG CTGAACAAGG CATTGCAGAA GCACAAAGCA AGCTCGGCGG GATGTATGCA AAAGGACGAG GTGTTACACA AAACTATCAA CAAGCTGTCT ATTGGTTCAC AAAAGCTGCC GAACAGGGAG ATGCAAAAGT ACAACTCCTT CTCGGCTTGA TGTATGAAAA CGGCCGAAGT GTTACACAAA ACTATCAACA AGCCGTCTAT TGGTACACAA AAGCCGCTGA ACAAGGCATT GCAGAAGCAC AACTCTATCT CGGCGTGATG TATGAATTCG GACGAGGGGT GCAAAAAAAT GTTTCTACAG CTAAAGAATT CTACGGTAAA GCATGCGATA ACGGCAACGC TCAGGGATGT AAAGATTTCG CCAGATTAGA TCGGAAAGGG GGGCGTTAA
|
Protein sequence | MKLKKFLLIA LLSFGIAQSA LAETNSEKFD RAYQFIEQQN YSAAFPLFKQ LAEQGLANAQ YNLGVMYKKG RGVAQSDTQA VYWWKKAAEQ GLADAQYNLG LMYKKGRGVA QSDTQAIYWY TKAAEQGIAE AQSKLGGMYA KGRGVTQNYQ QAVYWFTKAA EQGDAKVQLL LGLMYENGRS VTQNYQQAVY WYTKAAEQGI AEAQLYLGVM YEFGRGVQKN VSTAKEFYGK ACDNGNAQGC KDFARLDRKG GR
|
| |