Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0295 |
Symbol | trmD |
ID | 4239497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 294228 |
End bp | 294965 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638103835 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_718503 |
Protein GI | 113460441 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000141791 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGATCG GGATTATTAG TCTATTTCCT GAAATGTTCA AAGCTATTAC GGAATACGGA GTAACAGGAC GAGCAGTTAG GCAAAACCTG CTGGAGATAC AATATTGGAA TCCGAGAGAT TTCACCTTTG ATAAACATAA AACGGTAGAT GATCGCCCTT ATGGTGGAGG ACCGGGAATG TTAATGATGG TGCAACCTTT GCGTGATGCC ATTCATTGTG CAAAGTCTGT GGCAGGTGAT GGTGTGAAAG TGATTTATCT TTCGCCTCAA GGACGTAAAC TGGATCAAAA TGGTGTTCAA GAGCTTGCCA GAAATCAAAA AATGATTTTT GTTTGCGGGC GTTATGAAGG CATTGATGAA CGATTGATTG AAACTGAAAT TGATGAAGAA TGGTCAATCG GAGATTATGT TCTTACCGGT GGGGAATTGC CGGCGATGAC GTTGATTGAT GCAGTCGCAA GATTTGTTCC CTGTGTTTTG GGTAAACAAG CCTCTGCACA AGAAGATTCT TTTGCAGAAG GGCTATTAGA TTGCCCACAT TACACAAGAC CGGAACAATT AAACGGTTTA ACTGTACCTC CTGTATTGAT GTCTGGTAAT CATGAGGAAA TTCGTAAGTG GAGATTAAAG CAGTCTTTGC AACGAACATG GTTAAGACGA CCTGAGCTAT TGGAAAGCCT AGCTCTGACT GACGAACAAA GTAAGCTGTT ATCGCAGATT AAACAAGAAA ACAGTTAA
|
Protein sequence | MWIGIISLFP EMFKAITEYG VTGRAVRQNL LEIQYWNPRD FTFDKHKTVD DRPYGGGPGM LMMVQPLRDA IHCAKSVAGD GVKVIYLSPQ GRKLDQNGVQ ELARNQKMIF VCGRYEGIDE RLIETEIDEE WSIGDYVLTG GELPAMTLID AVARFVPCVL GKQASAQEDS FAEGLLDCPH YTRPEQLNGL TVPPVLMSGN HEEIRKWRLK QSLQRTWLRR PELLESLALT DEQSKLLSQI KQENS
|
| |