Gene HS_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0280 
Symbol 
ID4239481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp280440 
End bp280847 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content38% 
IMG OID638103820 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_718488 
Protein GI113460426 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.886112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA CATCAAAAGG GCGGTATGCG GTAACAGCTA TTTTGGATAT TGCGTTAAAT 
GCTGAGCTTG GACCTGTTAG TTTAGCGGAT ATCTCTGAAC GACAGCATAT TTCCCTTTCT 
TATTTAGAAC AGCTTTTTGC TAAATTACGC CGTGGTGGTT TAGTGAAAAG TGTGCGTGGT 
CCTGGTGGTG GGTATCAGTT AGGATTATCT ACTGAGCAGA TCTCCATTGG CATGGTAATT 
AATGCAGTTA ATGAAAATAT TAACGTTACA AAATGTTTGG GGAATGGCGA TTGTCAGGGG 
GGAGTAAAAT GCTTAACTCA TTCTTTGTGG GAAGAATTGA GTGTACGAAT TGAAAATTTC 
TTAAATGAAA TAACGATTGC AGAATTAGTT GCAAAACAAG CCAAGTGA
 
Protein sequence
MKLTSKGRYA VTAILDIALN AELGPVSLAD ISERQHISLS YLEQLFAKLR RGGLVKSVRG 
PGGGYQLGLS TEQISIGMVI NAVNENINVT KCLGNGDCQG GVKCLTHSLW EELSVRIENF 
LNEITIAELV AKQAK