| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0250 |
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| Symbol | pilA |
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| ID | 4239766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 249107 |
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| End bp | 249565 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638103787 |
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| Product | fimbrial subunit |
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| Protein accession | YP_718458 |
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| Protein GI | 113460396 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0333044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAA CCTATATTTT TTCATCAGTT AAAAAAGGAT TTACTCTCAT AGAACTGATG
ATTGTTATTG CTATTGTGGC AATTCTTGCA ACCATTGCAA TTCCGTCATA CCAAAATTAT
ACAAAAAAAG CTGCAATTAC AGAGCTATTG CAAGCTTCAG CTCCTTATCG TGCAGAAGTT
GAGCTATGCG TGTATAACAA TGATGCACCG ACAAATTGTA ATGCTGGAAC AAATGGAATT
CAAGCAGCAA TCAATACACC AAAAGGTAAA GTAAAATCAA TTACCGTTAA AGGTGGAGCC
ATTACTGTTA CAGGGAATGG AAATCTTAAA GATATTACTT ATACTTTAAC ACCAACAGGC
GATGCTTCAA CCGGCGTTAC TTGGAGTGCA AATTGCAATA ATAAGGCCGA TCTATTTCCT
GCCGGATTTT GCTCTTCTAC GTCTACAAAC TCTCCTTAA
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| Protein sequence | MKITYIFSSV KKGFTLIELM IVIAIVAILA TIAIPSYQNY TKKAAITELL QASAPYRAEV
ELCVYNNDAP TNCNAGTNGI QAAINTPKGK VKSITVKGGA ITVTGNGNLK DITYTLTPTG
DASTGVTWSA NCNNKADLFP AGFCSSTSTN SP
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