Gene HS_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0202 
SymboloadA 
ID4239717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp187361 
End bp189160 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content41% 
IMG OID638103738 
Productoxaloacetate decarboxylase 
Protein accessionYP_718409 
Protein GI113460348 
COG category[I] Lipid transport and metabolism
[C] Energy production and conversion 
COG ID[COG0511] Biotin carboxyl carrier protein
[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID[TIGR01108] oxaloacetate decarboxylase alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACTC ACGAGAAAAA AATTTCTATA ACTGACGTAG TTTTACGTGA TGCACACCAA 
TCCCTTTTTG CTACACGTTT ACGCCTTGAT GATATGTTAC CTATTGCAGC CGAACTGGAT
AAAATCGGCT ACTGGTCGCT TGAGGCTTGG GGTGGTGCCA CTTTTGATGC CTGTATCCGC
TTTTTAGGTG AAGATCCTTG GGTTCGCTTG CGTGAATTGA AAAAAGCTAT TCCAAATACC
CCGTTACAAA TGTTATTACG TGGGCAAAAT TTATTGGGCT ATCGTCATTA TGCCGATGAT
GTTGTGAATA AATTTGTTGA GCGTGCGGTT GCAAACGGTA TGAGCGTTTT CCGTGTATTT
GATGCAATGA ATGATCCGAG AAATATGCAA CAAGCGTTAA GAGCGGTGCG TAAAAATGGC
GGACATGCAC AAGGCACATT GAGTTATACA ACAAGTCCGG TACATACGTT AGAAACTTGG
TTAGACACCA CTGAGCAATT GTTAGAAATC GGGATCGACT CGCTGGTCAT TAAAGATATG
TCCGGAATTT TATCTCCTGT CGAAGCATAC AAATTAGTCA GCGAAATCAA AAAACGCTAC
GATGTGCGTT TACATATGCA CTGTCATTCA ACGACAGGTA TGGCGGAAAT GGCATTACTC
AAAGCCATAG AAGCAGGTGC GGATGGCATT GACACAGCAA TTTCCTCTAT GAGCGGTACT
TACGGACATC CGGCAACAGA GGCATTAGTA GCTACATTAG ATAACACACA GTACGATACC
GGATTAAGTA TTCCACAACT TGAGCGTATT GCTGATTATT TCCGTAATGT ACGCAAAAAA
TACGCTAAAT TTGAAGGGCA ATTGAGAGGC GTGGATAGCC GTATTTTAGT TGCTCAAGTA
CCGGGAGGAA TGCTGACTAA TTTAGAAAAT CAACTCAAAC AACAAAATGC TTCAGATAAA
CTGGATAAAG TTTTGCAGGA AATTCCAAAA GTGCGGGCTG ATTTAGGCTA TATTCCGCTA
GTTACACCAA CCTCACAAAT TGTCGGGACT CAAGCAGTGA TTAATGTATT AATGGGTGAG
CGTTATAAAA CCATCGCAAA AGAAACCGCA GGTATTTTGA AAGGGGAATA TGGTCGCACC
CCGGCACCGG TAAATGCAGA ATTACAAGCA AAAGTCTTAG CGGGTGAGCA ACCTATTACT
GATCGTCCGG CAGATCATCT TGCACCGGAA ATGGATAAAC TATCCACAGA AATAAAACGA
ATGGTAAAAG AAAAAGGTAT TCAACTTGCA GAGAATGAAA TTGATGATGT ATTAATTGTT
GCACTTTTCC CTCAAGTTGG ATTGAAATTC TTAGAAAATC GAGGTAATCC GAATGCTTTT
GAGCCGGTAC CAACCAACGA AGTAAAAACA AGTGAAAAAC CGACCGCACT TTCAAGTAGA
AATGATAGTG CTGTTTACAC GGTTGAGGTA GAGGGAAAAT CTTTTGTAGT GAAAGTTACT
GAAGGCGGTG ATATTAGTCA TATTACACCT GTCTCGACCG CACCTAGCAC ACAATCAACA
GAATCGGCAA CAAGTGCAAC TACAAAAAAT ATACCGGTAA ATGCACCTAT GGCTGGAAAT
ATCTGGAAAG TACTGGTAAA AGAAGGACAA CAAGTTGCGG AAGGAGAAGT CTTGCTCATT
TTAGAAGCAA TGAAAATGGA AACAGAAATT CGAGCCGCTA CCTCAGGAAC TGTACAGGGT
ATAAAAGTGA AAGCGGGTGA TACTGTGGCT GTGGGTGATA TCTTATTAAC TTTAGCGTAA
 
Protein sequence
MATHEKKISI TDVVLRDAHQ SLFATRLRLD DMLPIAAELD KIGYWSLEAW GGATFDACIR 
FLGEDPWVRL RELKKAIPNT PLQMLLRGQN LLGYRHYADD VVNKFVERAV ANGMSVFRVF
DAMNDPRNMQ QALRAVRKNG GHAQGTLSYT TSPVHTLETW LDTTEQLLEI GIDSLVIKDM
SGILSPVEAY KLVSEIKKRY DVRLHMHCHS TTGMAEMALL KAIEAGADGI DTAISSMSGT
YGHPATEALV ATLDNTQYDT GLSIPQLERI ADYFRNVRKK YAKFEGQLRG VDSRILVAQV
PGGMLTNLEN QLKQQNASDK LDKVLQEIPK VRADLGYIPL VTPTSQIVGT QAVINVLMGE
RYKTIAKETA GILKGEYGRT PAPVNAELQA KVLAGEQPIT DRPADHLAPE MDKLSTEIKR
MVKEKGIQLA ENEIDDVLIV ALFPQVGLKF LENRGNPNAF EPVPTNEVKT SEKPTALSSR
NDSAVYTVEV EGKSFVVKVT EGGDISHITP VSTAPSTQST ESATSATTKN IPVNAPMAGN
IWKVLVKEGQ QVAEGEVLLI LEAMKMETEI RAATSGTVQG IKVKAGDTVA VGDILLTLA