Gene HS_0194 details

Gene Information

• Locus tag: HS_0194
• Symbol: secE
• ID: 4239705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 175187
• End bp: 175594
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 638103726
• Product: preprotein translocase subunit SecE
• Protein accession: YP_718401
• Protein GI: 113460340
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0690] Preprotein translocase subunit SecE
• TIGRFAM ID: [TIGR00964] preprotein translocase, SecE subunit, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000062993
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAG AAATTACAAA AAATAAAGTG GCTCCAGAAA TTGAGCAAAA ATCGAAAGGT 
CTGAATGGCT TTTTATGGTT GTTAGTGGTT GCTATTGTTA TTGTGGCGGC TGTAAGTAAT 
ATTTACTTAG TAGAAAAATT TTCAACAGCT CTTCGTGTTG TGGGTATTGT TGTTGCTTTA 
CTTATTGCTT TAGGTATCGC CGCTATTACT AATCAAGGTA TGAAAGCCAG AAGATTTTTT 
TCCGATTCTC GTATTGAGCT GAGACGAATC ACATGGCCTA CTCGCCCTGA GGCAATGCAA 
ACAACATTAA TTGTATTTGC TGTGACTGTA ATAGCATCAT TAATTTTATG GGGATTGGAT 
TCAGTTATCG TTTCATTAAT TACATTTTTA ACGGATTTAA GGTTCTAA 

 

Protein sequence

MALEITKNKV APEIEQKSKG LNGFLWLLVV AIVIVAAVSN IYLVEKFSTA LRVVGIVVAL 
LIALGIAAIT NQGMKARRFF SDSRIELRRI TWPTRPEAMQ TTLIVFAVTV IASLILWGLD 
SVIVSLITFL TDLRF