Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0175 |
Symbol | rpe |
ID | 4239686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 155873 |
End bp | 156559 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638103707 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_718382 |
Protein GI | 113460321 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCTT ATTTAATTGC TCCATCTATA CTTTCTGCTA ATTTAGCACG TCTTGGTGAA GATGTAGAAA ATGTGCTAAA GAGCGGTGCT GATGTAATTC ATTTTGATGT GATGGATAAT CATTATGTAC CAAATTTAAC CTTTGGGCCT GCGATTTGTA AGGCATTGCG TGATTATGGA ATTAAAGCAC CTATTGATGT ACATTTAATG GTTAAACCGG TAGATCGTAT TATTCCTGAT TTTGCTAAAG CCGGTGCTGA TTATATTACG TTTCACCCGG AAGCCAGTGA ACATATCGAT CGTTCTTTGC AACTGATTCG GGATTGTGGT TGTAAGGCTG GTCTTGTTTT TAATCCAGCA ACACCATTGA GTTATTTAGA TTATGTATTG GATAAGATTG ATGTGATTTT GCTTATGTCT GTGAATCCCG GATTTGGGGG ACAAGCTTTT ATTCCAAGCA CATTAGAAAA GTTAAAACAG GCTCGTAAAA TTATTGATGA AAGTGGCTTG GATATTCGCT TAGAGGTAGA CGGTGGAGTA AAAGTGAATA ATATTGCTGA AATTGCTCAA GCTGGAGCCG ATATGTTTGT GGCAGGATCT GCAATTTTTG ATCAGCCTGA TTATAAAAAA GTTATTGATG AAATGCGTCA GCAACTTTCT ACAATAAGAG AGAAGGAAAC AAAATGA
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Protein sequence | MTPYLIAPSI LSANLARLGE DVENVLKSGA DVIHFDVMDN HYVPNLTFGP AICKALRDYG IKAPIDVHLM VKPVDRIIPD FAKAGADYIT FHPEASEHID RSLQLIRDCG CKAGLVFNPA TPLSYLDYVL DKIDVILLMS VNPGFGGQAF IPSTLEKLKQ ARKIIDESGL DIRLEVDGGV KVNNIAEIAQ AGADMFVAGS AIFDQPDYKK VIDEMRQQLS TIREKETK
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