Gene HS_0144 details

Gene Information

• Locus tag: HS_0144
• Symbol: radC
• ID: 4239653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 129244
• End bp: 129912
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638103674
• Product: DNA repair protein RadC
• Protein accession: YP_718349
• Protein GI: 113460290
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00783617
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAC AAAATACAAC TTTAATGCCG AGAGAAAAAC TACTGAAATA TGGAGCTTCA 
TCACTTGATG ATAAGGAATT ATTAGCGATT TTCTTACGTA CAGGTATAAA AAATTGTCCT 
GTTATGCAAC TCTCCGAGTT GGTACTTGCT CATTTTTCTT CTTTAAGAGG ATTAATTAAT 
GCAGATCAAA AGCATTTTTG CCAAATGAAA GGATTGGGTA TTACTCAATT TGTACAATTA 
CAAGCCTGTA CTGAAATGAC CAAACGTTAT CTCTTACAAG AATTACAGTT TGCACAAGAA 
TTTACCAGCC CTGATACGGT TCGTATGTAT TTACAGACTG AATTGGAAAA TAAAGATAGA 
GAAATTTTTA TGGTACTGTT TTTGGATAAT CAACATCGTT TAATAAAAAA AGAGGAAATG 
TTTTTAGGTA CCATTAACCA GGCAAATGTT TATCCTCGTG AGATTATTAA AACCGCACTA 
TTTTGTAATG CAGCCGCACT TATTCTTGCA CATAATCATC CTTCCGGTGT TTCAACGCCA 
AGCATGGCAG ACAGAAAAAT GACCGAGAAT ATAAAACAAC TATCAGAATT AATGGAAATC 
CGTGTTTTAG ATCATTTTAT CATTGGTAAA GGTAACTATT TCTCCTTTGC AGAACAAGGC 
TGGATCTAG 

 

Protein sequence

MTQQNTTLMP REKLLKYGAS SLDDKELLAI FLRTGIKNCP VMQLSELVLA HFSSLRGLIN 
ADQKHFCQMK GLGITQFVQL QACTEMTKRY LLQELQFAQE FTSPDTVRMY LQTELENKDR 
EIFMVLFLDN QHRLIKKEEM FLGTINQANV YPREIIKTAL FCNAAALILA HNHPSGVSTP 
SMADRKMTEN IKQLSELMEI RVLDHFIIGK GNYFSFAEQG WI