| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0132 |
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| Symbol | trmE |
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| ID | 4239640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 118067 |
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| End bp | 119425 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638103661 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_718336 |
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| Protein GI | 113460278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.849325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGAG ATACTATTGT AGCTCAAGCA ACGCCTATTG GACGTGGCGG AGTTGGGATT
TTACGTGTAT CAGGACCTTT AGCTCAGCAG GTTGCTGAAC AAGTACTCGG TAAAACCTTA
ACACCTAGGA TGGCAAATTA TCTTCCTTTT AAAGATTCTG ATGGTACTGT ATTGGATCAA
GGGATAGCAC TTTATTTTAA AGCTCCCAAT TCTTTTACCG GAGAAGATGT TCTTGAGTTA
CAAGGACATG GCGGACAAAT CGTCATGGAT CTTTTATTAA AACGTATTTT GCAAATTGAC
GGTATTCGTT TGGCACGACC GGGCGAATTT TCTGAACAGG CGTTTCTTAA TGATAAATTA
GATTTAGCTC AAGCAGAAGC AATTGCTGAT TTAATTGAGG CGAGTTCGGA GCAAGCAGCA
CGTTCTGCGT TAAAATCATT GCAAGGTGAG TTTTCAAATA AAATCAATGA ATTAGTTGAC
TCAGTTATTT ATTTACGCAC TTATGTTGAA GCAGCAATTG ATTTCCCTGA CGAAGAAATT
GACTTTCTTG CAGATGGTAA AATTGAAACG CATTTACGTG AAATAATAGC CAAGTTAGCT
AAAGTAAAAA ATGAGGCAAA ACAAGGGGCT ATTTTACGTG AAGGAATGAA AGTAGTCATT
GCCGGTCGCC CAAATGCCGG AAAATCCAGT TTATTAAACA CACTAGCAGG GCGTGAGGCG
GCAATTGTTA CGGATATTGC CGGAACAACT CGAGATGTTT TGCGTGAGCA TATTCATATT
GACGGAATGC CTTTACATAT TATTGATACG GCAGGGTTAC GTGATGCAAC CGATGAGGTC
GAAAAAATTG GTATTCGTCG TGCTTGGGAT GAAATTGAAC AGGCTGATCG TATTTTGTTA
ATCTTGGATA GCACGGAAAA TCAAGTTGAA CTGGATTTAG TGCAGTCTGA ATTTATGGCA
AAATTACCGC CACATATTCC TTTAACCATA GTAAGAAACA AAGCTGATTT AAGTGGTGAA
GCAGAAGTTT TAGATGAACA AAACGGTTTA GCTGTTATTT CATTGTCGGC AAAAACACAA
AAAGGTGTTG ATTTGTTGCG TCAGCATTTA AAACAGTCCA TGGGCTATCA AGTCTGCACT
GAGGGGGGAT TTTTAGCCCG TCGTCGTCAT TTAGAGGCAT TAGAACAAGC TGACATTCAT
TTACAAGCCG GATTGATTCA GTTGACAGAA TTTTATGCAG GTGAATTAGT CGCTGAAGAA
CTGCGTATAG CACAACATCA TCTAAGTGAA ATTACAGGAC AATTTACTTC CGATGATTTA
TTAGGCAATA TTTTTAGCTC TTTCTGTATC GGCAAATAA
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| Protein sequence | MSRDTIVAQA TPIGRGGVGI LRVSGPLAQQ VAEQVLGKTL TPRMANYLPF KDSDGTVLDQ
GIALYFKAPN SFTGEDVLEL QGHGGQIVMD LLLKRILQID GIRLARPGEF SEQAFLNDKL
DLAQAEAIAD LIEASSEQAA RSALKSLQGE FSNKINELVD SVIYLRTYVE AAIDFPDEEI
DFLADGKIET HLREIIAKLA KVKNEAKQGA ILREGMKVVI AGRPNAGKSS LLNTLAGREA
AIVTDIAGTT RDVLREHIHI DGMPLHIIDT AGLRDATDEV EKIGIRRAWD EIEQADRILL
ILDSTENQVE LDLVQSEFMA KLPPHIPLTI VRNKADLSGE AEVLDEQNGL AVISLSAKTQ
KGVDLLRQHL KQSMGYQVCT EGGFLARRRH LEALEQADIH LQAGLIQLTE FYAGELVAEE
LRIAQHHLSE ITGQFTSDDL LGNIFSSFCI GK
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