Gene HS_0123 details

Gene Information

• Locus tag: HS_0123
• Symbol: rpiA
• ID: 4239631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 111246
• End bp: 111905
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638103652
• Product: ribose-5-phosphate isomerase A
• Protein accession: YP_718327
• Protein GI: 113460269
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCAGT TAAGCATGAA AAAAATGGCT GCTCAAGCTG CACTGCAATA TGTTAAGCCT 
GATAGCATTA TTGGCGTAGG AAGCGGTTCA ACTGTCAACT GTTTTATTGA AGTATTAGGT 
ACAATAAAAG AAACAATCAA AGGTGCTGTC GCAGCTTCAA AAGCATCAGA AGAATTATTA 
CTCCGACAAG GTATCGAGGT ATTCAGTGCA AATGATGTAT CCGGTTTAGA TATTTATGTC 
GATGGTGCAG ATGAAATTAA TCCGCAAAAA ATGATGATTA AAGGTGGCGG AGCAGCATTG 
ACACGTGAAA AAATTGTAGC TGCATTGGCA AAAAAATTCA TATGTATAGT AGACAGTTCT 
AAACAAGTGG ATGTATTAGG CTCAACGTTC GCTTTGCCGA TAGAGGTGAT TCCAATGGCT 
CGCTCTCAAG TTGCACGCAA ATTAGTGGCG TTGGGCGGTT CACCTGAATA TCGTGAAAAT 
GTGGTTACAG ATAATGGTAA TGTTATTTTA GATGTATATA ACTTTAAAAT TATGAATCCG 
ATAGAAATGG AAAAAGAATT GAATAATGTG GCCGGCGTGG TAACAAATGG GATTTTTGCT 
TTACGTTCTG CAGATATTGT TATTGTAGGT ACGCCGGAGG GTACAAAAAT TATTGAATAA 

 

Protein sequence

MDQLSMKKMA AQAALQYVKP DSIIGVGSGS TVNCFIEVLG TIKETIKGAV AASKASEELL 
LRQGIEVFSA NDVSGLDIYV DGADEINPQK MMIKGGGAAL TREKIVAALA KKFICIVDSS 
KQVDVLGSTF ALPIEVIPMA RSQVARKLVA LGGSPEYREN VVTDNGNVIL DVYNFKIMNP 
IEMEKELNNV AGVVTNGIFA LRSADIVIVG TPEGTKIIE