| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0091 |
|---|
| Symbol | thiD |
|---|
| ID | 4239600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 83783 |
|---|
| End bp | 84595 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638103623 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_718298 |
|---|
| Protein GI | 113460240 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TTGCAATCGC ATTGACTATT GCCGGTTCGG ATAACAGCGG TGGTGCAGGT
ATTCAAGCAG ATTTAAAAAC TTTCCAAATG CAAAAAGTTT TTGGTATGAC CGCAATTACG
GCTGTTACCG CTCAAAATAG TTTGGGTGTT TACGATATTC ACCCCGTCCC TCCGGCAACT
ATTCGCTCTC AACTTAAAGC CATTGCCGAA GATTATCAAG TTTCTGCTTT GAAAATTGGT
ATGCTTGGCA ATGTCGATAT TATTCAATGC GTGGCAGAAG AATTGGAAAA ATATGATTTT
GGCAAAATTG TTCTAGATCC TGTGATGTAT GCCAAAGGTG GTGCTGCGTT ATTAGAACCT
GCCGCCGTCA GCACATTACG TTCACTATTA TTACCCAAAA CGGATGTGAT TACGCCAAAT
TTACCTGAGG TGGCGGCATT AACCGATATT CATGTTGTCG ATGATCATAC CGCTCGCCTT
GCTGCTGAAA AATTGTTGGT AATGGGGGTG AAAAATGTGG TGATTAAAGG TGGACATAGC
CAAAACTCAC AAAGCGAAAT ATGTAGAGAT TGGTTATTTA CCCAACATAG TAGTTTGAAA
CTTGACAGTC CACGTTTTGA TACACCTCAT ACTCATGGAA CAGGTTGCAC TTTCTCAGCC
TGTATTGTAG CGGAGCTGGC TAAAGGCGAA AGTGTACAAA GTGCGGTCAG AACAGCAAAA
GATTTTATTA GTGCTTCCAT TAGCCACCCA TTAAATATTG GGCATGGGCA TGGACCGACA
AATCATTGGG CATATTCGCA AGGAACAAAA TAA
|
|---|
| Protein sequence | MSKVAIALTI AGSDNSGGAG IQADLKTFQM QKVFGMTAIT AVTAQNSLGV YDIHPVPPAT
IRSQLKAIAE DYQVSALKIG MLGNVDIIQC VAEELEKYDF GKIVLDPVMY AKGGAALLEP
AAVSTLRSLL LPKTDVITPN LPEVAALTDI HVVDDHTARL AAEKLLVMGV KNVVIKGGHS
QNSQSEICRD WLFTQHSSLK LDSPRFDTPH THGTGCTFSA CIVAELAKGE SVQSAVRTAK
DFISASISHP LNIGHGHGPT NHWAYSQGTK
|
|---|
| |