Gene HS_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0090 
SymbolthiE 
ID4239599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp83118 
End bp83783 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content42% 
IMG OID638103622 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_718297 
Protein GI113460239 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACATA AATACGATAT TGCTACAGCT ATGCGACTTT ACTTTATTGC GGGAAGCCAA 
GATGTAACGC ATTTCGCCAG CGATCCTGCC GATAATTTAC TCTCGGTATT GGAACAAGCA 
CTACAAGCAG GCATTACTTG CTATCAGTTC CGTGAAAAAG GAAAAAGAGC GTTGCAAAAT 
CCTATCGCTT ATAAGGCACT TGCCATCGCT TGTCGAAATT TGTGCAGGAA ATACAAAGTG 
CCATTTGTAG TTAATGATGA TGTCGCTTTA GCCGTTGAGA TCGGGGCGGA CGGTATTCAT 
GTTGGACAAA CGGATATGCC TCCCCATCAA GTCAAACGGC TTTGCACAGG AAAATGTTTT 
GTTGGGACTT CTGTCAATAC CATTGAACAA GGCTTAATCG CTCAAAATGA TCCTAATGTA 
GATTATTTCG GCGTCGGTCC GATTTTTCCA ACGCAATCGA AAGAAGATGC TGAACCTGTG 
CTTTCACCTG CTTTTATTAC GCAAATTCGT GCTAATCATA TTGATAAACC CATGGTGGCA 
ATTGGCGGTA TCAAGGTAAA AGATGTTGCA ATGCTGATGG CGAAAGGTGC AAACGGTGTG 
GCGGTGATCT CCGCCATTAC GCAATCTAAC CATATTGAAA AAACGGTGAA AGAATTATTG 
AGATAA
 
Protein sequence
MQHKYDIATA MRLYFIAGSQ DVTHFASDPA DNLLSVLEQA LQAGITCYQF REKGKRALQN 
PIAYKALAIA CRNLCRKYKV PFVVNDDVAL AVEIGADGIH VGQTDMPPHQ VKRLCTGKCF 
VGTSVNTIEQ GLIAQNDPNV DYFGVGPIFP TQSKEDAEPV LSPAFITQIR ANHIDKPMVA 
IGGIKVKDVA MLMAKGANGV AVISAITQSN HIEKTVKELL R