| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0084 |
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| Symbol | rpoA |
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| ID | 4239593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 78204 |
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| End bp | 79193 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638103616 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_718291 |
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| Protein GI | 113460233 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000268564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGGTT CTGTTACAGA ATTTTTAAAG CCACGTTTAG TTGATATTGA GCAAATTAGT
TCTACTCATG CTAAAGTGAT CTTAGAACCG TTAGAGCGTG GCTTTGGTCA TACTCTAGGT
AATGCATTGC GTCGAATTCT TCTATCTTCT ATGCCGGGCT ATGCAGTTAC CGAGGTGGAA
ATAGATGGCG TATTGCATGA ATATAGTAGT AAGGAAGGTG TTCAGGAGGA TATTATTGAG
GTACTTCTGA ACTTAAAAGG TCTAGCGGTT AAAGTACAGA ATAAGGATAA TGTTTTTCTG
ACACTAAGCA AATCTGGAAT TGGCCCTGTT GTTGCAGCTG ACATTACTCA TGATGGTGAT
GTTGAAATCG TAAATCCTGA TCATGTTATC TGTCACTTAA CAGACGAAAA TGCGTCTATT
AATATGCGTA TTCGTGTACA ACGTGGTAGA GGGTATGTGC CGGCATCATC TAGAGTTCAT
TCTTTAGATG AAGAACGTCC GATTGGTCGT TTGTTAGTTG ATGCTTGTTA TAGTCCAGTT
GATCGTATTG CTTATAATGT ACAAGCAGCA CGTGTTGAAC AACGAACTGA CTTAGATAAG
TTGGTTATTG AACTGGAAAC AAATGGCACA ATCGAGCCAG AGGAAGCGAT CCGTCGTGCT
GCAACGATTT TAGCAGAGCA ACTAGATGCC TTTGTTGATT TGCGAGATGT TCGTCAACCA
GAAGTTAAGG AAGAAAAACC GGAGTTTGAT CCGATTTTAT TGCGTCCTGT TGATGACTTA
GAGTTGACAG TTCGTTCTGC TAACTGTTTG AAAGCAGAAA CAATTCATTA TATCGGTGAT
TTGGTACAGC GTACTGAAGT TGAGTTACTG AAAACACCTA ATTTAGGTAA AAAATCTCTT
ACAGAGATTA AAGATGTGCT TGTTTCACGC GGTCTATCAC TTGGTATGCG CCTCGAAAAT
TGGCCACCAG CAAGTATTGC TGAAGACTAG
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| Protein sequence | MQGSVTEFLK PRLVDIEQIS STHAKVILEP LERGFGHTLG NALRRILLSS MPGYAVTEVE
IDGVLHEYSS KEGVQEDIIE VLLNLKGLAV KVQNKDNVFL TLSKSGIGPV VAADITHDGD
VEIVNPDHVI CHLTDENASI NMRIRVQRGR GYVPASSRVH SLDEERPIGR LLVDACYSPV
DRIAYNVQAA RVEQRTDLDK LVIELETNGT IEPEEAIRRA ATILAEQLDA FVDLRDVRQP
EVKEEKPEFD PILLRPVDDL ELTVRSANCL KAETIHYIGD LVQRTEVELL KTPNLGKKSL
TEIKDVLVSR GLSLGMRLEN WPPASIAED
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