| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0082 |
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| Symbol | rpsK |
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| ID | 4239591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 77132 |
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| End bp | 77521 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638103614 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_718289 |
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| Protein GI | 113460231 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000625128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA CACCAGTTCG TACACGTAAA CGTGTAAAAA AACAAGTTGT AGATGGCGTT
GCTCATATTC ACGCATCTTT CAATAATACA ATCGTTACAA TTACTGACCG TCAAGGGAAT
GCTCTAGCAT GGGCAACTGC AGGTGGTTCA GGTTTCCGTG GTTCTCGTAA ATCTACCCCT
TTTGCTGCAC AAGTTGCAGC AGAACGTTGT GCCGAAGTTG TAAAAGAATT CGGTTTAAAG
AACTTGGAAG TTATGGTTAA GGGGCCGGGT CCTGGTCGTG AATCAACAAT CCGTGCTTTA
AATGCAGCGG GATTTCGTAT CACGAATATT ACAGATGTGA CTCCGATTCC ACATAACGGT
TGTCGTCCAC CGAAGAAACG TCGTGTTTAA
|
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| Protein sequence | MAKTPVRTRK RVKKQVVDGV AHIHASFNNT IVTITDRQGN ALAWATAGGS GFRGSRKSTP
FAAQVAAERC AEVVKEFGLK NLEVMVKGPG PGRESTIRAL NAAGFRITNI TDVTPIPHNG
CRPPKKRRV
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