Gene HS_0075 details

Gene Information

• Locus tag: HS_0075
• Symbol: rplF
• ID: 4239583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 73101
• End bp: 73634
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638103606
• Product: 50S ribosomal protein L6
• Protein accession: YP_718281
• Protein GI: 113460224
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0536854
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TTGCAAAAGC ACCTGTTAGT ATTCCTGCCA GCGTTGAGGT AAAACTTGAC 
GGTCAGCTAC TAACAGTAAA AGGTAAAAAT GGTGAGTTAT CTCGCACCAT TCATAACTCA 
GTTGAAGTTA AACAAGATAA TAATCAATTA ACATTCTCTC CTCGTGTAGG TATTGCTAAT 
GCTGATGCAC AATCAGGCAC AGCACGTGCA TTGGTCAATG CGATGGTTAT CGGTGTTAAT 
GAAGGTTTTA CTAAAAAGTT ACAGTTGGTG GGTGTTGGTT ATAGAGCACA AATGAAAGGC 
AATGTACTTG TGCTAAGTTT AGGCTTTTCA CATCCTATTG ACCATGTGTT ACCAGCTGGT 
GTAACTGCTG AATGTCCATC ACAAACAGAA ATTGTTCTGA AGAGTGCTGA CAAGCAATTG 
ATTGGTCAGG TTGCAGCTGA TATTCGCGCT TATCGCCGTC CTGAGCCTTA CAAAGGTAAA 
GGGGTACGTT ATGCTGATGA AGTTGTACGT ATGAAAGAGG CCAAGAAGAA ATAA 

 

Protein sequence

MSRVAKAPVS IPASVEVKLD GQLLTVKGKN GELSRTIHNS VEVKQDNNQL TFSPRVGIAN 
ADAQSGTARA LVNAMVIGVN EGFTKKLQLV GVGYRAQMKG NVLVLSLGFS HPIDHVLPAG 
VTAECPSQTE IVLKSADKQL IGQVAADIRA YRRPEPYKGK GVRYADEVVR MKEAKKK