Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0055 |
Symbol | |
ID | 4239563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 60920 |
End bp | 61798 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638103586 |
Product | aldolase |
Protein accession | YP_718261 |
Protein GI | 113460204 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.471008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATT TAGATGATAT TAAAGACGGT AAAGATTTTG GTATTGGTAT TCCTCAAACT AACAAGCTTT TTTTCGTCAA AGGTTCCAGT GCATTAGATT GGGGAATGCA ATCACGTCTT GCCAATATCT TTAATCCCAA AACAGGTAAG ACAATTATGT TAGCCTTTGA TCACGGCTAT TTCCAAGGTC CGACGACGGG TCTTGAGCGC ATTGACCTCA ATATTGCACC GCTCTTTGAT TATACCGATG TATTGATGTG TACCCGTGGT ATTTTAAGAA GCGTTGTACC GCCGGATACC CGGAAATCTA TTGCTTTAAG AGCGTCTGGT GCAAATTCTA TTTTGACAGA ACTTTCTAAC GAAGCAGTTG CAGTTAGTAT TGAGGATGCT TTGAGATTAA ATGTATCCGC CATGGCTGCA CAGGTTTATA TCGGTTCTGA ATATGAACAT CAATCGATTA AAAATATTAT TCAATTGGTC GATCAGGGTA ATCGCTATGG AATGCCTGTG ATGGCAGTAA CTGGTGTAGG GAAGGATATG GCTCGTGATC AACGCTACTT CTCACTTTCG ACTCGTATTG CCGCAGAAAT GGGGGCTCAC ATTATTAAAA CTTACTATGT TGATAGGGGA TTTGAGCGGG TTACAGCAGG TTGCCCTGTA CCGATTGTAA TTGCCGGAGG TAAAAAATTA CCGGAATTGG ATGCTCTTGA AATGTGCTAT CAAGCAATTG ATCAAGGTGC AGCTGGTGTG GATATGGGCA GAAACATTTT TCAATCTGAA GCACCAATTG CGATGATCAA GGCGGTGCAA GCGGTTGTTC ACGGTGGAGA AAATGCAAAA GATGCCTACC AACTCTATTT AAGTGAGAAA AACAACTAA
|
Protein sequence | MADLDDIKDG KDFGIGIPQT NKLFFVKGSS ALDWGMQSRL ANIFNPKTGK TIMLAFDHGY FQGPTTGLER IDLNIAPLFD YTDVLMCTRG ILRSVVPPDT RKSIALRASG ANSILTELSN EAVAVSIEDA LRLNVSAMAA QVYIGSEYEH QSIKNIIQLV DQGNRYGMPV MAVTGVGKDM ARDQRYFSLS TRIAAEMGAH IIKTYYVDRG FERVTAGCPV PIVIAGGKKL PELDALEMCY QAIDQGAAGV DMGRNIFQSE APIAMIKAVQ AVVHGGENAK DAYQLYLSEK NN
|
| |