Gene HS_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0055 
Symbol 
ID4239563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp60920 
End bp61798 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content42% 
IMG OID638103586 
Productaldolase 
Protein accessionYP_718261 
Protein GI113460204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.471008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATT TAGATGATAT TAAAGACGGT AAAGATTTTG GTATTGGTAT TCCTCAAACT 
AACAAGCTTT TTTTCGTCAA AGGTTCCAGT GCATTAGATT GGGGAATGCA ATCACGTCTT
GCCAATATCT TTAATCCCAA AACAGGTAAG ACAATTATGT TAGCCTTTGA TCACGGCTAT
TTCCAAGGTC CGACGACGGG TCTTGAGCGC ATTGACCTCA ATATTGCACC GCTCTTTGAT
TATACCGATG TATTGATGTG TACCCGTGGT ATTTTAAGAA GCGTTGTACC GCCGGATACC
CGGAAATCTA TTGCTTTAAG AGCGTCTGGT GCAAATTCTA TTTTGACAGA ACTTTCTAAC
GAAGCAGTTG CAGTTAGTAT TGAGGATGCT TTGAGATTAA ATGTATCCGC CATGGCTGCA
CAGGTTTATA TCGGTTCTGA ATATGAACAT CAATCGATTA AAAATATTAT TCAATTGGTC
GATCAGGGTA ATCGCTATGG AATGCCTGTG ATGGCAGTAA CTGGTGTAGG GAAGGATATG
GCTCGTGATC AACGCTACTT CTCACTTTCG ACTCGTATTG CCGCAGAAAT GGGGGCTCAC
ATTATTAAAA CTTACTATGT TGATAGGGGA TTTGAGCGGG TTACAGCAGG TTGCCCTGTA
CCGATTGTAA TTGCCGGAGG TAAAAAATTA CCGGAATTGG ATGCTCTTGA AATGTGCTAT
CAAGCAATTG ATCAAGGTGC AGCTGGTGTG GATATGGGCA GAAACATTTT TCAATCTGAA
GCACCAATTG CGATGATCAA GGCGGTGCAA GCGGTTGTTC ACGGTGGAGA AAATGCAAAA
GATGCCTACC AACTCTATTT AAGTGAGAAA AACAACTAA
 
Protein sequence
MADLDDIKDG KDFGIGIPQT NKLFFVKGSS ALDWGMQSRL ANIFNPKTGK TIMLAFDHGY 
FQGPTTGLER IDLNIAPLFD YTDVLMCTRG ILRSVVPPDT RKSIALRASG ANSILTELSN
EAVAVSIEDA LRLNVSAMAA QVYIGSEYEH QSIKNIIQLV DQGNRYGMPV MAVTGVGKDM
ARDQRYFSLS TRIAAEMGAH IIKTYYVDRG FERVTAGCPV PIVIAGGKKL PELDALEMCY
QAIDQGAAGV DMGRNIFQSE APIAMIKAVQ AVVHGGENAK DAYQLYLSEK NN