Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0045 |
Symbol | hemD |
ID | 4239553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 48677 |
End bp | 49345 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638103576 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_718251 |
Protein GI | 113460194 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCC ATTTACCGCT TATTTCCATT ATAGCGGGGC AAGAATTAAA TCGATTACCC AATAAATTAC AACAATTAAA TTGTGGTGAT TATGTAGTTG CAGTATCTAA AAATGCGGTG GAATATGCAC AAAAAACCTT AAGTGCGGTA GGTTTTTGTT GGCGTTCGGA CTTATATTAC TTTACGGTTG GACAACGAAC TGCAGAATAT TTTGCGAGCC AAATAGAAAA TTCGGTGTAT TATCCTGTTG AGCAAGAAAG TAGTGAAGGA TTACTTAATT TACCTCAAAT GCAAGACCTT CAGGCAAGGA ATATTTTGAT TTTGAGAGCG AATGGAGGAC GGGAATTTTT TACTGAGCAG GCTATTTTGC GAGGAGCTAA AGTTGAAACT CTGGAATGTT ATCAACGAAT GCCCATTGAA TATAATAAGT TGGAAAAAAT TAGTTTATGC CAACGTATTG GGGTAGATAC CATTGTTGTA ACAAGTCAAG AGATGTTAAA TTACTTAGTG AAACTTGTGC CAACCAATGA AACAGGCTGG TTATTCAGTT GTCGTTTGGT AACGGTAAGT CAACGTATAG CGGCATTGGC AAAAAGTGTT GGGTGGACAA ATATTGTTGT GGCAGATAAA GCGGATAACT TGAGTCTTTT CCTTGCATTG CAACAATGA
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Protein sequence | MALHLPLISI IAGQELNRLP NKLQQLNCGD YVVAVSKNAV EYAQKTLSAV GFCWRSDLYY FTVGQRTAEY FASQIENSVY YPVEQESSEG LLNLPQMQDL QARNILILRA NGGREFFTEQ AILRGAKVET LECYQRMPIE YNKLEKISLC QRIGVDTIVV TSQEMLNYLV KLVPTNETGW LFSCRLVTVS QRIAALAKSV GWTNIVVADK ADNLSLFLAL QQ
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