Gene HS_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0042 
SymbolnarP 
ID4239550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp44316 
End bp44945 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content37% 
IMG OID638103573 
Productnitrate/nitrite response regulator protein 
Protein accessionYP_718248 
Protein GI113460191 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACA AAACAAAAGT ACTCTTAATA GACGATCATC CTTTGATGCG ACGAGGTATT 
AAACAATTGC TTGAGCTGGA TGAATCTTTT GAAGTCATAG GTGACGCCGG AAGTGGAAGT
GAAGGTGTAA ATCTGGCATT GCAGTTAGAA CCTGATTTGA TCATTTTAGA TCTAAATATG
AAAGGATTAT CCGGACTGGA TACATTAAAG GCTTTACGCA CAGAAGGAAT TGATGCAAGA
ATTCTAATAC TTACCGTTTC TGATGCGAAA AATGATATTT TCACATTAAT CGATGCAGGA
GCTGACGGTT ATTTATTAAA GGATACGGAA CCGGATACCC TACTCTCTCA GATAAAACGA
GTTACACAAG GCGAAGTCAT TCTCAGTGAA TCGATCAAAA ATTTACTGTT AGAACGTCAA
CATAAAGATG ATCCTATTTA TTCCCTCACA GATCGGGAAA TGAATGTACT GGCACTCATT
GCGACAGGAT TAGCAAATAA ACAAATTGCA GGACAATTAT TTATTTCAGA GGAAACTGTA
AAAGTACATA TTCGCAATTT ATTACGTAAA TTAAACGTTC ATTCTCGGGT TGCCGCAACA
GTTTTGTACT TCCAGCATAA AGGCGTATAA
 
Protein sequence
MSDKTKVLLI DDHPLMRRGI KQLLELDESF EVIGDAGSGS EGVNLALQLE PDLIILDLNM 
KGLSGLDTLK ALRTEGIDAR ILILTVSDAK NDIFTLIDAG ADGYLLKDTE PDTLLSQIKR
VTQGEVILSE SIKNLLLERQ HKDDPIYSLT DREMNVLALI ATGLANKQIA GQLFISEETV
KVHIRNLLRK LNVHSRVAAT VLYFQHKGV