| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0039 |
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| Symbol | rsmB |
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| ID | 4239547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 41203 |
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| End bp | 42591 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638103570 |
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| Product | ribosomal RNA small subunit methyltransferase B |
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| Protein accession | YP_718245 |
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| Protein GI | 113460188 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAT CTCAGCACAA CAAAACTAAA AGAGCGGTCA AATCTACCGC ACTTTTCACG
CCTCGCTCAG TCCGTGTGCT TGCGGCAGAA GTAATTTTAC AAGTTTTAGT TCAAGGTAAA
TCCCTTTCTA CCTTGCTGCC TGAGCAACAA AGTGCGGTCA AACCTCAAGA TTTTCCGCTA
CTACAAGAAA TTTGTTTTGG TATTTGTCGT GTGTTACCTC GCTTAGAACG CATCATTCAA
CTCCTACTGG ATAAGCCTTT GAAAGGTAAA ACTCGGATCG TGCACTGCTT GTTGTTGGTC
GGTTTATACC AAATTTTATA TACCCGAATT CCTGCTCATG CTGCAGTGGA CGAAGTCGTT
TCTGCCACGA AAAGTTTAAA ATCAGATAGT TTCCGTGGCC TGTTAAATGC TGTTTTGCGT
CGCTTTTTGC GGGAACAAGA ACAAATTCTG GCGATAGTGG ATAAGCATTG GCAAACCTTA
CATCCAGAAT GGTTAGTGAA TAAACTAAAA CAATCTTATG CCAATTGGCG TGAAATTGTT
GAAGCGAATA ACCAAAAACC TCCGATGTGG CTACGCATTA ATTTACAACA TTGTTCTATT
GCGGATTATC AACAACTTTT AATGGAGCGA GGAATATCTA CATCAACAAC GAATCACCCA
CAAGCATTAC GCCTACATCA AGCAAGTGCG GTCAATTTAT TACCCTATTT TGAACAAGGA
TGGGTGAGCG TTCAGGATCT ACACGCACAA TGGTCAGCCT TATTACTCGA ACCGGAAAAT
AACGAACTTA TTTTAGACGC TTGTGCGGCA CCGGGCGGAA AGACTACACA TATTTTAGAA
CAAGCACCCA ACGCAAAAGT CATCGCTTTA GATATTGAAC CTGCTCGTCT ACAACGTGTG
AAAGAAAATT TAGTTCGTAT GAAACAACAA GCTATAATAA TTTGTGGTGA TGCAACCCAG
CCGGAGCAAT GGTTATCAGA GATTGATTTT AATGCTATAG GACTGACATT TAAATCTGAA
AGTGCGGTGC AATTTGACCG AATTTTATTA GATGCTCCTT GTTCCGCTAC CGGTGTTATT
CGTCGACACC CTGATATAAA ATGGCTACGC CAAGAAAGTG ATATTACTCC CCTAGTGCAA
TTGCAAGGAC AAATTTTAGA AGCCCTTTGG AAAAAATTAA AACCACAAGG TATTTTAGTT
TATGCGACCT GTTCTTTATT ACCTGAAGAG AATAGTCAAC AAATTCAGCA TTTCTTAACC
AAGCACAATG ATGCAAAATT AGAACCTTTG CCTTTTACCA TTGGGGAGGA AATTGGTCAT
CAATTTGTTC CAACAGAACA GGGAGGTGAC GGTTTTTATT ATGCCAAATT AAGAAAACTG
CCCAATTAA
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| Protein sequence | MSKSQHNKTK RAVKSTALFT PRSVRVLAAE VILQVLVQGK SLSTLLPEQQ SAVKPQDFPL
LQEICFGICR VLPRLERIIQ LLLDKPLKGK TRIVHCLLLV GLYQILYTRI PAHAAVDEVV
SATKSLKSDS FRGLLNAVLR RFLREQEQIL AIVDKHWQTL HPEWLVNKLK QSYANWREIV
EANNQKPPMW LRINLQHCSI ADYQQLLMER GISTSTTNHP QALRLHQASA VNLLPYFEQG
WVSVQDLHAQ WSALLLEPEN NELILDACAA PGGKTTHILE QAPNAKVIAL DIEPARLQRV
KENLVRMKQQ AIIICGDATQ PEQWLSEIDF NAIGLTFKSE SAVQFDRILL DAPCSATGVI
RRHPDIKWLR QESDITPLVQ LQGQILEALW KKLKPQGILV YATCSLLPEE NSQQIQHFLT
KHNDAKLEPL PFTIGEEIGH QFVPTEQGGD GFYYAKLRKL PN
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