Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0029 |
Symbol | araC |
ID | 4239537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 30320 |
End bp | 31048 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638103560 |
Product | DNA-binding transcriptional regulator AraC |
Protein accession | YP_718235 |
Protein GI | 113460178 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.773429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAAT TAACTACTTT TGGTACAGGC ATTATTTTCG ATGGTAAACA TTCTTTTTCC ACTCATCGAG GACAGCTGCT ACTATTCACA CCAAGTGCGG TTCAACATTA TCACAGACAT CCAGAAAGTC AGTATTGGCA CTATAAATGG ATCTATTTTT TACCAAACCC AAAATGGAAT AAATGGTTAA ATTGGTCAAA TATAGAGGAA AAAATAGGGC GTATTACCAT TGGTGATGAC CGCTACTTTC AGGAAATCAG TCAGCTTTTC AGCAAAATTG AAGTCGAATT GAAATCAAGT AAATTTTTTA AAGAAGATGT AGCCACCAGT CTATTAGAAT ACTTACTTAT GAAAAGTATT TCTGCCGAGA AAATTGAAGT TATTCCAGTA ATTGATCAGC GTATTTTAAA TGTTTGTGAT TTAATTTTGA CCAATTTGGC TAAAAATGAC AGCTTAGAAG CACTAGCAAA AAAAGTATTT TTATCGCCAT CAAGATTATC TCACCTTTTT AAACAATCTT TGGGTATTGG CTTAGTGCAA TGGAGAGAAG TACAGCGTAT TTCCGAAGCT AAAAAATTAC TTTATTTCTC TAACATTTCT ATCTCAAATA TTGCTAAATC TTTAGGCTAT GAAGATTCTC TCTACTTTTC GAAAATTTTC AAAAAACACA CCGCACTGTC TCCGTCTAAA TTTAGAACTT TAGAAAGATG TAAAAACAAT GAAATGTGA
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Protein sequence | MLQLTTFGTG IIFDGKHSFS THRGQLLLFT PSAVQHYHRH PESQYWHYKW IYFLPNPKWN KWLNWSNIEE KIGRITIGDD RYFQEISQLF SKIEVELKSS KFFKEDVATS LLEYLLMKSI SAEKIEVIPV IDQRILNVCD LILTNLAKND SLEALAKKVF LSPSRLSHLF KQSLGIGLVQ WREVQRISEA KKLLYFSNIS ISNIAKSLGY EDSLYFSKIF KKHTALSPSK FRTLERCKNN EM
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