| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0022 |
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| Symbol | |
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| ID | 4239530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 23475 |
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| End bp | 24458 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638103553 |
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| Product | dicarboxylate-binding protein |
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| Protein accession | YP_718228 |
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| Protein GI | 113460171 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00664942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA AAAAATTAAC TAAAGTATTA GTTGTTGCAG GCTTAGTATT TAGTAGTTCG
GCATTTGCTA AAACTGTAAT TAAAATCGGA CATTTTAATT CCGATATGCA CCCGTCAAAT
ATTGTATTAA ACGAAGTTTT CAAGAAAACC GTTGAAGAAA AAACGCAAGG TCGCTATGAA
ATTCGTATTT TCCCAAATAA TCAATTGGGC GGCGAAGATC AAATCGTAAA TGGCTTACGC
AATGGTACGA TTGAAGGTGG AATTACCGGC TTATTATTAC AAAATGTGGA TCCTATTTTT
GGTGTGTGGG AAATGCCGTA TTTATTTAAA GACAATGTTG AAGCGAAAAA GGTATTGGAA
TCTCCGATTG CAAAAGAAAT TGGCGATAAA ATGGAACAAT ACGGTATTAA ATTATTAGCT
TACGGCATGA ACGGTTTTCG TGTGATTTCG TCCAATAAAA AATTGGAAAA ATTCGATGAT
TTCAAAGGAT TACGTTTAAG AGTGCCATTG AATTCCTTGT TTGTGGATTG GGCAAAAGCA
ATGAATATTA ACCCGCAAAG CATGCCTTTA AGTGAAGTCT TTACTGCATT AGAGCAAAAA
GTGATTGATG GTCAAGAAAA TCCATATATG TTGCTCAAAG ATTCCGGTTT GTATGAAGTA
CAAAAATACA TTATCCAAAC TAACCATATT TTCTCACCGG GATTATTGCA ATTAAGCTTG
AAAACTTGGA ATAAAATGTC AAAAGAAGAT CAAGAAATTT TCTTAGAAGC GGCTAAATTA
TATCAAGAGA AAGAATGGGA ATTAGCGATG AAGATGGAAC AAGATGTTAA AGACTTCTTC
CATAAAAACG GTAAAGAAGT AATTATTCCG TCCGAGCAGT TTAAAGCAGA TATGTTGAAA
GCCTCTGAAA CACTTTATCA AAATTTTTAT CAAAAATATG ATTGGGCAAA AGGCGTGATT
GAAAAAATTC AAGCCGCTAA ATAA
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| Protein sequence | MKLKKLTKVL VVAGLVFSSS AFAKTVIKIG HFNSDMHPSN IVLNEVFKKT VEEKTQGRYE
IRIFPNNQLG GEDQIVNGLR NGTIEGGITG LLLQNVDPIF GVWEMPYLFK DNVEAKKVLE
SPIAKEIGDK MEQYGIKLLA YGMNGFRVIS SNKKLEKFDD FKGLRLRVPL NSLFVDWAKA
MNINPQSMPL SEVFTALEQK VIDGQENPYM LLKDSGLYEV QKYIIQTNHI FSPGLLQLSL
KTWNKMSKED QEIFLEAAKL YQEKEWELAM KMEQDVKDFF HKNGKEVIIP SEQFKADMLK
ASETLYQNFY QKYDWAKGVI EKIQAAK
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