| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0017 |
|---|
| Symbol | gntP |
|---|
| ID | 4239524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 16926 |
|---|
| End bp | 18398 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638103547 |
|---|
| Product | GntP family permease |
|---|
| Protein accession | YP_718222 |
|---|
| Protein GI | 113460166 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATT TAGACAGTGC ACAAGAAACA CTAAGCCTTT ACGCTCAGCA GATTATCACT
CTAAATCATA GATTCTATGA AGAATTTAAT AGAGTAATGG AAATGATGAT AGGCAATCCT
TACTCCACCC TTGTGCGGTT ACTTCTGCGA GCAAAGTTAT ATTCACATTG GAATTAG
|
|---|
| Protein sequence | MFDLPIPIIG LLIAVFVLVY LVLKTRVHAF IAMLIASAIA GLIGGMSVNE TLGAISKGFG
GTLGGIGIVI GLGVMMGSVL EVSGAAEKMA YSFIKLLGKK KEEWALAITG YIVSIPIFVD
SAFVILYPVA KALAKNGKRS LLTLGVALAG GLVVTHHTVP PTPGPLGVAG LFAVDIGAML
LVGMALAILP VIGIVLYAKW LDKKYPEFNQ QVFTQEELKQ KYDDYIESRE KKNLPSLGLS
LLPIVLPIVL IFIKAMFDLT AKGHAELAQM GVYQFFAFVG HPMIALAISV LVAVYTLLPK
ADRDSTALHL EEGVKTAGII LLVTGAGGAL GAVLRDSGAG KQLAEQIASL PISPILIPFI
VSTLVRFIQG SGTVAMVTAA SISAPILAQI PGVNMLLAAQ AATMGSLFFG YFNDSLFWVV
NRMMGINDVK KQMIVWSVPT TIAWGIGGIS VILCNLVWGN DGSLFDLLFP IAVMAIIAFY
IKFQNRTLNK
|
|---|
| |