Gene HS_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0011 
Symbol 
ID4239518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp11348 
End bp12106 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content32% 
IMG OID638103541 
Productsugar metabolism transcriptional regulator 
Protein accessionYP_718216 
Protein GI113460160 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCGG CAGAAAGACA AAAAAAACTT CTTAAGCTGA TTAGTAAGCA AGAGATTATT 
AGTATCAATG AATTAGTAAA ATTATTAGAT GTATCTCATA TGACTGTTCG TCGAGATATT
CAAAAATTAG AGCAAGAAGG TATTGTTGTT TCAGTTTCCG GCGGTGTGAA ATTATTAGAA
CATTTATTTA TTGAACCGAC ACACAATGAC AAATCTTTGC TTTCCACGCT ACAAAAAGAA
AAAATTGGTA GTCGAGCGGC TGAGCTAATA CCGGTAAATA CAACTATCTA CTTAGATGCT
GGAACAACAA CATTAGAAAT CGCACATAAT ATTGCTCAAC GAGAAGATCT GTTGGTGATT
ACAAATGATT TTGTGATAGC TAATTTCTTG ATGAAACATG GACAATGTGA ATTAATTCAT
ACAGGAGGAT CAATTAATAA ATCTAATTTC TCCTCTGTTG GTGAATTGGC TACACAGTTA
TTGAAACAGC TTTCAATTGA TCTGGCATTT ATTTCCACAT CATCTTGGAA TTTAAGAGGC
TTAACTACAC CGGATGAGAA AAAACTGCCT GTTAAAAAAG CAATATTGCA ATCCAGTTAC
AACAAAATTT TGGTATCTGA TTCTTCTAAA TATGGAAAAA CAGCTACATT TTCTATTTGT
GAATTAAATG TATTCAATAG CATTATTTGC GATGACAAGC TGTTACTAAA TGCCCAAGAA
TCGATAAAAG AAATGGAAAT TGAGTTAATT TTAGTGTAA
 
Protein sequence
MIPAERQKKL LKLISKQEII SINELVKLLD VSHMTVRRDI QKLEQEGIVV SVSGGVKLLE 
HLFIEPTHND KSLLSTLQKE KIGSRAAELI PVNTTIYLDA GTTTLEIAHN IAQREDLLVI
TNDFVIANFL MKHGQCELIH TGGSINKSNF SSVGELATQL LKQLSIDLAF ISTSSWNLRG
LTTPDEKKLP VKKAILQSSY NKILVSDSSK YGKTATFSIC ELNVFNSIIC DDKLLLNAQE
SIKEMEIELI LV