Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_C0015 |
Symbol | |
ID | 4206689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008265 |
Strand | - |
Start bp | 16105 |
End bp | 17850 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | |
Product | putative phage terminase, large subunit |
Protein accession | YP_699944 |
Protein GI | 110804033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGATA GAGTTACTAG GTACGCTATA GATGTACTTG AAGGGAAAGA AGTTGCTGGA AGATATGTTA AGTTAGCGTG TCAAAGGCAT ATTGATGACT TAGAAAGATC TAAATTAGCA CCTTATAAAT ATGAATTTGA TTTAGAAAAA GCTTTAGAAT CTATTGATTT TTTTGAAGAT TTAAGGTTTA CAGATGGTGA AATAGCTGGT CAACAAGTTA AGCTTTTTGG ATTTCAAGAT TTTATTGTTG GTTCAATATT TGGATGGGTT TGTAAAGGAA CTGGTTATAG GAGATTTAAA AAATCTTATG TTCAGTTAGC AAGAAAAAAT GCTAAATCGC TTTTAAATAG TGGAATAGGT ATAAAATTAG CAGCATTTGA CAAATATCCG AATGCACAGG TTTACTGTAC AGCAACAAAA ATGAAACAAG CTAGAATTGT ATGGAAACAA GCTAGAAAGT TTATAGAAAT TGAACCAGAT TTAAGAGAAA TATTCAAAAT AAAAGATCAT GATGCAATTA TAGAATCGTT GATTAATGGT GGAGAAATAA TGGCTTTGGG AAGAGATACT GGTACTATAG ATGGATTTGA CCCACACGGT GGAATAATTG ATGAATATCA TAGCCATAAG ACTAATCAAA TGGTTAAGCT GCTTGAAGAT GGTTCAGTAA ACCAAGCGGA AAGTTTAATT TCTATTATAA CGACAGCGGG ATTTAATTTA AATGGTCCAT GTTATAAAGA ATGGGAATAT TGTAAAAATG TTTTAGAAGG AATAGTTAAT AATGATGAGT ATTTTATTTA TATTGCTCAA ATGGATGTAG AAGATGACAT ATGGGACCCT AATAATTGGC TTAAAGCTAA TCCTTTAGTT GCAAAACTTC CTAAAGGCCT TGAAAATTTA AAAAGGTTTG CTGAAGAATC AAAACAAAAA GGTGGAGATG ATTTAAAAAA CTTTTTAACT AAATCATTGA ATATATGGTA TGAGTTTTCT AATGACCAGT ATATTGGGCC GAGTGTTTGG AAGGTTGGAG CTTCTAAATT AACATTAGAA AATTTTAAAG GTAAAACATG TTATGCTGGT TTAGATTTAT CTAGTGGAGG GGATTTAACT TCATTAGCTC TTATATTTCC TTATGAATTT GAAAAAGAAA ATGGGGAGAA AGTAAGAAAA TATTTTATAC ATTCCCATAG TTTTATTCCG AAGAGAAGAG TTGCAGAACA TATTCAAAGT GATGATGTAC CATATGATGT TTGGATAGAA AATGGGTTAT TAACAGTAAC GGAAACACTT GGAGGAATAA AAACAGATTA CAAATATATA ATTAAGTATT TAAGAGATTT AATTGAAGAA TTTCAACTTA AAATAATTCA ATTAGGATAT GATCCTCACA ATGCAGATAC TTTTCTTCAA GATTTAGAGG AGTTAGGATT TGATTGTGTA GAAATATTTC AAAGTTGTAA GTGGCTCAAT GATCCAACAG AAGATTTTAA GCTTGAATGT GAAGCTGGAA ATATAGAATA TAATGAGGAA AATGAGTTAC TAAGTTGGTC AGTTGTAAAT GCTAAGTTAG TTTCAAATTC AAATGGAGAA ATAAAAATTG ATAAGAATTT ACAAGAAAAA AGAATAGATC CAGTTGATGC TGTTATAGAC GCATATAAAT TAGCTTTTAA ATCTGAAAAA TTAAATACTA AAGTGGATAT AAATAAATAT GCTGAAAAAG ACTTCTTGAA TAAGTTGTGG AGTTGA
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Protein sequence | MDDRVTRYAI DVLEGKEVAG RYVKLACQRH IDDLERSKLA PYKYEFDLEK ALESIDFFED LRFTDGEIAG QQVKLFGFQD FIVGSIFGWV CKGTGYRRFK KSYVQLARKN AKSLLNSGIG IKLAAFDKYP NAQVYCTATK MKQARIVWKQ ARKFIEIEPD LREIFKIKDH DAIIESLING GEIMALGRDT GTIDGFDPHG GIIDEYHSHK TNQMVKLLED GSVNQAESLI SIITTAGFNL NGPCYKEWEY CKNVLEGIVN NDEYFIYIAQ MDVEDDIWDP NNWLKANPLV AKLPKGLENL KRFAEESKQK GGDDLKNFLT KSLNIWYEFS NDQYIGPSVW KVGASKLTLE NFKGKTCYAG LDLSSGGDLT SLALIFPYEF EKENGEKVRK YFIHSHSFIP KRRVAEHIQS DDVPYDVWIE NGLLTVTETL GGIKTDYKYI IKYLRDLIEE FQLKIIQLGY DPHNADTFLQ DLEELGFDCV EIFQSCKWLN DPTEDFKLEC EAGNIEYNEE NELLSWSVVN AKLVSNSNGE IKIDKNLQEK RIDPVDAVID AYKLAFKSEK LNTKVDINKY AEKDFLNKLW S
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