| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_C0012 |
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| Symbol | |
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| ID | 4206662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008265 |
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| Strand | - |
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| Start bp | 12738 |
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| End bp | 13952 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | |
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| Product | phage major capsid protein, HK97 family |
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| Protein accession | YP_699941 |
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| Protein GI | 110804052 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 88 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAG AATTAAGAGA ATTATTAAAT CAGTTAGATT CAAAGAATAA GGAGTTAAAT
TCTTTATTAA ATAAAGATGG AGTAACAGCT GAAGAATTAA ATAAAACTTC AAATGAAATA
GATATTTTAC AAGCAAAAAT TGAAGCTCAA AAAAGAAAAG AAAATATTGA AAATAACTTC
AATGAAGATA ATGTTAAGTC TTTAAATACA GGAAAAGAAG AAAATGTTAT TTATAATGGT
GCTTTATTTG TTAGAGCAAT AGCAGACAAT TTACTTAAAC AAAAAAATCA AAGAGGATTA
AATCTTTCTG AAAAAGAAAT AAATGCTATA TCAGAAAATA TAGATGAAGA TGGTGGCTAT
GCTGTTCCAG AGGATATTCA GACAAAGATT AATACAAGAT TAAAAGACAC AACAGATTTA
TATAACATGG TAGATTATGA GCCTGTATTT ACTAGAAGTG GTAGTAGAAC ATATGAAAAG
AGAAGTAAGC AAAAACCTAT GAAACCATTA AGTGAAAACC AACAGATTCC TACTAATGGC
GATAATGGTA AACTTGAGAG ATTTAATTTT AAATTAAAAG ATTTAGCAGA TTTTATGTCA
ATACCAAATG ATTTATTAAA ATTTGCTGAT AAAAGTTTAG AAGATTGGAT AATAAATTGG
TTTGTAGATA AAGTTAGAAT AACTAGAAAT GCAGAAATTT TATATGGAGC AGGTGGAGAT
GAACATGCTA CTGGTATTAT GACAGCAAAT AAATTTAAAA AGATTACATT ACCAAAATCA
CCAGCATTAA AGGATTTTAA GAAATGTAAA AATGTTGAGT TATTAAATGT ATTTAAAGCA
ACTTCTAGTT GGATTGTTAA TCAAGATGGA TTTAACTACT TAGATAGTTT AGAAGATAAG
ACAGGTAGAC CATATCTTCA ACCAGATCCA AAAGACCCAA CACAATATAG ATTCTTAGGA
TTACCAGTTA TTGAATTACC TAACGACCTT TTATTATCAA CTGAAAGTGC TATTCCAGTT
TTATTAGGTG ATACAAAAGA AGCTTATAAA TATGTTTCAG ATGGAGCATA TGAACTCGCT
ACAACAAATA TAGGAGCTGG AGCATTTGAA ACTAACACAA CAAAGGCAAG AATAATAATG
AGAATAGATG GAAATGTTAA AGATTCAGAA GCATTATTAA TTGCAGAAAT TCCAGTTGAA
TCAGTACAAG CTTAA
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| Protein sequence | MSKELRELLN QLDSKNKELN SLLNKDGVTA EELNKTSNEI DILQAKIEAQ KRKENIENNF
NEDNVKSLNT GKEENVIYNG ALFVRAIADN LLKQKNQRGL NLSEKEINAI SENIDEDGGY
AVPEDIQTKI NTRLKDTTDL YNMVDYEPVF TRSGSRTYEK RSKQKPMKPL SENQQIPTNG
DNGKLERFNF KLKDLADFMS IPNDLLKFAD KSLEDWIINW FVDKVRITRN AEILYGAGGD
EHATGIMTAN KFKKITLPKS PALKDFKKCK NVELLNVFKA TSSWIVNQDG FNYLDSLEDK
TGRPYLQPDP KDPTQYRFLG LPVIELPNDL LLSTESAIPV LLGDTKEAYK YVSDGAYELA
TTNIGAGAFE TNTTKARIIM RIDGNVKDSE ALLIAEIPVE SVQA
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