| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_B0007 |
|---|
| Symbol | |
|---|
| ID | 4206639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008264 |
|---|
| Strand | - |
|---|
| Start bp | 6875 |
|---|
| End bp | 7315 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 20% |
|---|
| IMG OID | 642567239 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_699926 |
|---|
| Protein GI | 110804010 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 173 |
|---|
| Plasmid unclonability p-value | 0.000565726 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATT TGTATAATGA ATTTTTAAAA TATGAATATA ACGAATTAAA TGAGCTGTTT
AAAATGGCTA AAACTAAAGA AGAACAGGAC TTCTATATAG CATTGTGTAA CTTTAAATTA
CAAAAAGAAC AAAAGAAAGT TATTGGAAAT GACTTTGAAA TTGAGGTAAC CTTAAATGAA
ATATTAAATT GGGTTGAGTG TGAAACATTT AGATTAAATC TACCAGATAG TAAAACTTTT
TATTTTTCAA GTGAAAAAAG CAATGATAAT TATGATTTTA AAATATTTAA ATGTTTTAGC
TCTGATAAAG ATATTAAAAA TTTAAAAAAT ATAATAAGAT CTGAAATAGA AAGTGTTAAT
AATGAATATA GTGTTTGCAA AATAATAGTA AATGTAAGAT TTGGATCATT AACTTTTTAT
TTTAGAAATA AAAAAATATA A
|
|---|
| Protein sequence | MFNLYNEFLK YEYNELNELF KMAKTKEEQD FYIALCNFKL QKEQKKVIGN DFEIEVTLNE
ILNWVECETF RLNLPDSKTF YFSSEKSNDN YDFKIFKCFS SDKDIKNLKN IIRSEIESVN
NEYSVCKIIV NVRFGSLTFY FRNKKI
|
|---|
| |