| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_B0003 |
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| Symbol | |
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| ID | 4206645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008264 |
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| Strand | - |
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| Start bp | 3718 |
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| End bp | 4290 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 21% |
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| IMG OID | 642567235 |
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| Product | bacteriocin uviA |
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| Protein accession | YP_699922 |
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| Protein GI | 110804015 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 245 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAGAG TGCGTATGAG TGAATTATAT AAAAATATAG TATTATGTCA AAAAGGAGAT
AAAAAGGCTA TAGAATATAT AATAAATAAG TTTGAAATAT TAATTAATAA ATATAAAATG
TCTTTTCTTA AAGAGATCCA TTTTAATAGT TATGATGTTG AAGATAATAA ACAAGATTTA
ATAGTTAGTT TAATAAATAT AGTTAATAAA ATACCTATTG ATAATCCTCA ATTTGAAAAT
GAAGGGTGTT TAGTTAATTA TATTTATAGA TCAATATTAA ACAGTAGAAA GGACATGTAT
ATAAATAAAA ATATAAAAAG ATATTTTATT GAAAGTCAGT CTTTATCAAG CATGGTAGAG
TTTAAAGATA AGCCTTTGGT AAAATATATA GAATCTAATA TTGAAATTGA AGATATGCTA
AAATGCCTTA CAGAAAAAGA ACAAAAGGTT ATAAAATATA AATTTTTAAA TGATAAAAGT
GAGGTAGAGA TAGCTGAAAT AATGGGAACA TCAAGACAAT GGATAAATAG AATAAAGAAT
ACAGCTTTAA AAAAATTAAA AGAAAATATT TAG
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| Protein sequence | MGRVRMSELY KNIVLCQKGD KKAIEYIINK FEILINKYKM SFLKEIHFNS YDVEDNKQDL
IVSLINIVNK IPIDNPQFEN EGCLVNYIYR SILNSRKDMY INKNIKRYFI ESQSLSSMVE
FKDKPLVKYI ESNIEIEDML KCLTEKEQKV IKYKFLNDKS EVEIAEIMGT SRQWINRIKN
TALKKLKENI
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