Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2667 |
Symbol | gidB |
ID | 4204255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2889699 |
End bp | 2890418 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642567215 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_699902 |
Protein GI | 110803383 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATATT TTGATTTAAT GAAAAAAGCT TGCGATAGTG TGGGTATGGA ATTTAATGAA GACAAATATC AAAAATTTAT GCTTTACAAA GATTTATTAA AGGAATGGAA TGAAAAAATA AATTTAACGG CAATAACAGA GGATGAAGAG ATAGTAAAAA AACATTTTAT AGATTGTATA AAAGCTTTTA AAGCAGATGA GTTTAAAAAA GCTAAAACAG TAATAGATGT TGGAACAGGT GCAGGGTTCC CTGGGTTACC TATAGCTATT ATGAGAGAAG ATGTAGAGGT TACTCTATTA GACTCATTAA ATAAGAGAAT AAATTTTTTA AATGAAGTTG TAAATAAACT AGCATTAAAA AATGTTGAGA CTATACATTC TAGAGCAGAA GATGGTGCAA GAAAAAAAGA GTTAAGAGAA AATTTTGATA TTGCTACATC AAGAGCTGTT GCTAATATGT GTGTTCTAAG TGAATTTTGT ATTCCATATG TAAAGGTAAA TGGGAATTTT ATAGCTTTAA AAGGCCCAAA TATAACTGAA GAGTTAAATG ATTCAAAGAA TGCTATTGGT ACTTTAGGTG GTAAGCTTAA AGGTATAACT GAGGTTGAAA TTGAGGGAAC AGACTTAAAT CATAACTTAG TAATAGTAGA TAAAATAAAA AGTACGCCAA AGACTTTTCC TAGAAAAGCA GGTAATGTAA CTAAGAAACC ATTAAAATAA
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Protein sequence | MQYFDLMKKA CDSVGMEFNE DKYQKFMLYK DLLKEWNEKI NLTAITEDEE IVKKHFIDCI KAFKADEFKK AKTVIDVGTG AGFPGLPIAI MREDVEVTLL DSLNKRINFL NEVVNKLALK NVETIHSRAE DGARKKELRE NFDIATSRAV ANMCVLSEFC IPYVKVNGNF IALKGPNITE ELNDSKNAIG TLGGKLKGIT EVEIEGTDLN HNLVIVDKIK STPKTFPRKA GNVTKKPLK
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