| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2643 |
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| Symbol | sdhA |
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| ID | 4205853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2867678 |
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| End bp | 2868559 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642567191 |
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| Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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| Protein accession | YP_699878 |
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| Protein GI | 110802723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGCAA GAAGTGGTGC TGAATTATTA GAAATATGTA AAGAGAATAA TTTCTCCTTA
GCTGAATACG CTATTCAATA TGAAATGGAA AGTAAAAACT GTACTAGAGA AGATGTAATA
AAAGGTATGG AAAAAGTTCT TCAAGTTATG AAAGAGGCAG CTAATGAAGG GCAAGAAAAA
GAAGTTTATT CTGTAAGTGG ATTAATTGGC GGAGATGCTT ATAAATTAAA AAAATACTTA
GAAAAAGGGG ATACTTTAAC TGGGAATGTT ATGGTTGGCG CTATGGCAAG AGCCTTATCT
TGTTCAGAAG TAAATGCTTC CATGGGAAGA ATAGTGGCAT GTCCAACAGC TGGTTCTTGT
GGAATATTAC CTGCTGTAAT ATTAACAGTA GGAGAAAGAT TAAATCTAAG TGATGAAGAA
CTTATTCAAG GTTTATTGGC ATCCTCTGCT GTAGGTATGA TAATTGCGCA AAATGCAACA
TTAGCCGGTG CCGAAGGTGG ATGCCAAGCT GAATGTGGGT CTGCTGCTGC TATGGGAGCT
GCTGCCACTG TAGAAATGAT GGGTGGAACC CCTGAAATGG CTTTAGATGC TGGGGCAATA
GTATTTAAAA ATATACTTGG TCTAGTTTGT GATCCAATAG CTGGCTTAGT AGAAGTACCT
TGTGCTAAAA GAAATTTTGC AGGAGCAGTT AGTGCCTTAA CAACTGCCGA CTTAGTTATG
GCAGGCATAA ATAGCAAGAT ACCTTTTGAT GATACAGTTG AAGCTATGTA TAGAGTAGGA
AAATCTTTAC CTGCTTCTCT AAGAGAAACT GCCTTAGGTG GTTTAGCAAT TACTAAAACA
GGACTTAAAT TAAAAGAAAA AGTTTTTGGT AAAGATAAAT AA
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| Protein sequence | MIARSGAELL EICKENNFSL AEYAIQYEME SKNCTREDVI KGMEKVLQVM KEAANEGQEK
EVYSVSGLIG GDAYKLKKYL EKGDTLTGNV MVGAMARALS CSEVNASMGR IVACPTAGSC
GILPAVILTV GERLNLSDEE LIQGLLASSA VGMIIAQNAT LAGAEGGCQA ECGSAAAMGA
AATVEMMGGT PEMALDAGAI VFKNILGLVC DPIAGLVEVP CAKRNFAGAV SALTTADLVM
AGINSKIPFD DTVEAMYRVG KSLPASLRET ALGGLAITKT GLKLKEKVFG KDK
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