| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2585 |
|---|
| Symbol | |
|---|
| ID | 4204090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2814915 |
|---|
| End bp | 2815688 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642567135 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_699832 |
|---|
| Protein GI | 110801498 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA CAGTTTTAAT AACAGGGGCT ACTAGTGGAA TTGGATATGA ATTTTCAAAA
ATATTTATGG AAAACAATTA TGATGTAATA TTAGTAGGAA GAAATTTAGA AAAATTAATG
GAATTAGAAG ATTTTTCGAA GAAAAAATGT GTAATGGCTT ACATATATAA ATTTGATTTG
AGTTTAAGTG AAAACATAGA TTTTTTATAT AAAAAAATTA AAACTGAAGT AGGAAAAGTA
GATATATTAA TAAATAATGC TGGTATAGGA TTTAATGGAG AATTTAATGA AATAGATTGG
CAAAAGCAAT TAGATGTAAT AAATGTAAAT ATTATAAGTT TAACCAAATT AACTAAGCTT
ATTTTAAAAG ATATGATAAA TGAAAAGGAA GGGAAAATCT TAAATGTTGC CTCTACTGGG
GCCTATCAAC CAGGTCCATT AATTTTAGTT TATTATGCAA GTAAAGCATA TGTTTTATCG
TTTTCTGAGG CTTTAAGAGA AGAGGTTAAA GATAAGGGAA TTAATGTGGT TACTCTTTGC
CCAGGAGCTA CTAAGACGAA TTTTTCTAAG AGAGCTGGAA AGGGAGATTT AGATGTGGCA
ATGAGTGCAG AAAAAGTGGC TCAGTGTGGC TATAAGGCTT TGATAAACAA TAAGGCAATA
TGTATTCCTG GGATTATGAA TAAGGTATTA GTATTTTTAT CTAAAGTGTC TCCCACAACT
TTAAATGCAA AGATAGTAAA GAAAATACAA AATAAAGTTA TAAGTAAAAA ATAA
|
|---|
| Protein sequence | MKKTVLITGA TSGIGYEFSK IFMENNYDVI LVGRNLEKLM ELEDFSKKKC VMAYIYKFDL
SLSENIDFLY KKIKTEVGKV DILINNAGIG FNGEFNEIDW QKQLDVINVN IISLTKLTKL
ILKDMINEKE GKILNVASTG AYQPGPLILV YYASKAYVLS FSEALREEVK DKGINVVTLC
PGATKTNFSK RAGKGDLDVA MSAEKVAQCG YKALINNKAI CIPGIMNKVL VFLSKVSPTT
LNAKIVKKIQ NKVISKK
|
|---|
| |