| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2567 |
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| Symbol | cspB |
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| ID | 4205751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2794082 |
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| End bp | 2795776 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642567117 |
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| Product | protease CspB |
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| Protein accession | YP_699814 |
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| Protein GI | 110802592 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGAATA AAGCTAAGGG TGGAATAGAT TTTATAAATA TAATACCGAA GCAAATACTA
ACTAGATTAA TAGAAAAATA TTCGCCTAAT AATGAAGATA TAGAATTAGT TGTTTTATAT
GGGGATAATT TTTTCAAATT CAAGAATTCA GTAGATGCTA TAGGAGCAAA AGTTGAAGAC
TTAGGATATG GATTTGGAAT ACTTATAATA AAAGTTAATG ACTTAAATAG GATAATTGAG
CTTGATGGCC TTCAGTATAT AGAGTTACCT AAAATATTAT ATACATCAGC TTATGATAGC
AACAGAGCAT CATGTATTCC TTCAGTTTGG AATAATTATA ATTTAACTGG AGAAGGAATA
TTAGTCGGTT TTTTAGATAC TGGGATAGAC TATACTCATA ATGCTTTTAA AGATACTGAT
GGAAATACCA GGATAGAATA TATATACGAT CTTGAAAATG AAGTTGTATA TGACAAGAAT
AAAATAAATG AAGCTTTAAA ATCTGAAGAT CCATTTAGTA TTGTACCTGA AATTGATTTA
TCAGGTCATG GAACTCATGT TGCAGGAATT GCATGTGCTG GAGGAAATAT AAATTTTGAT
AATTATGGGG TTGCTTATAA AAGTAGCATA GCAATGGTAA AAATAACTAG TGGAAATAGT
TTAAGAGAAG CATTAAGTAC ACAACTCATG AAGGGTTTAA AATTTTTAAT GGATAAAAGT
AATGAGATTA ATAAACCTTT AGTTGTGAAT ATAAGTTTAA GTACAAATGA TGGTTCTCAT
AATGGAAATA GTTTGTTAGA AAAGTATATT CAAACTTTTT CTCAATTACA GAAAGCAGTT
ATTGTAGTTG CTGCTGGAAA TGAAGGTAAT AGTGCTCACC ATGTAGGTGG AAATATGAAA
AAAGAAGAAG AATTAGATTT AAATATAGGA GATGGAGAAA AGAGTATAAT ATTAGCTTTT
TTCAAGTCTG TACTAGTTGA TGTATCAGTT GAGGTAATTT CACCAACTGG AGTAAGTACG
GGACCTATGG AATTATCTGA ATCTTATAGA GAAAGATTTG TTGGAAAAGA AAAAATAGTT
GTATATAGTA CTGGTCCTAA ACCTTTTGAT ATACAAGGAC AAACTACAAT AAGTATTTTA
CCATTAGGAG ACACAATAAC TTCTGGTGGA TGGAGAATTA TAGTTAGAAA ATTAAATAAT
TATGATGGAT ATTTTGATAT TTGGTTACCT ATAGCAGAAG GATTAAATGA AAAAACAAGA
TTTTTACAAC CATCTGTTTA TAATACATTA GGAATCCCTG CAACTGTACA AGGGGTTATC
TCTGTTGGAA GTTATAATTT TTTAAATAAT AATTTATCAG CATTTTCTGG TAGGGGCGTT
GTTAGACCTG AATGGTTAAT AAAACCAGAT TTAGTTGCTC CTGGTGAAAA TATATTATCT
ACTGTTCCAG GACAAGGATT TGATACTAAA AGTGGTACAT CAATGGCTGC ACCACAAGTT
TCTGGGATAT GCGCTCTTCT TTTGGAATGG GGTATTATAA GAAACAATGA TCCTTTTTTA
TATGGACAAA AGATTAAATA TTATTTAATT AAAGGAGCAA GGAGGACCAT ATCTGGAGAG
GCTTATCCAA ATCCAGACTT AGGATATGGG TTTGTATGTT TAGAGAGAAC AATGGAATTA
TTAACTAATA GATGA
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| Protein sequence | MENKAKGGID FINIIPKQIL TRLIEKYSPN NEDIELVVLY GDNFFKFKNS VDAIGAKVED
LGYGFGILII KVNDLNRIIE LDGLQYIELP KILYTSAYDS NRASCIPSVW NNYNLTGEGI
LVGFLDTGID YTHNAFKDTD GNTRIEYIYD LENEVVYDKN KINEALKSED PFSIVPEIDL
SGHGTHVAGI ACAGGNINFD NYGVAYKSSI AMVKITSGNS LREALSTQLM KGLKFLMDKS
NEINKPLVVN ISLSTNDGSH NGNSLLEKYI QTFSQLQKAV IVVAAGNEGN SAHHVGGNMK
KEEELDLNIG DGEKSIILAF FKSVLVDVSV EVISPTGVST GPMELSESYR ERFVGKEKIV
VYSTGPKPFD IQGQTTISIL PLGDTITSGG WRIIVRKLNN YDGYFDIWLP IAEGLNEKTR
FLQPSVYNTL GIPATVQGVI SVGSYNFLNN NLSAFSGRGV VRPEWLIKPD LVAPGENILS
TVPGQGFDTK SGTSMAAPQV SGICALLLEW GIIRNNDPFL YGQKIKYYLI KGARRTISGE
AYPNPDLGYG FVCLERTMEL LTNR
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