Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2563 |
Symbol | |
ID | 4204780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2789211 |
End bp | 2790146 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642567113 |
Product | radical SAM family protein |
Protein accession | YP_699810 |
Protein GI | 110802237 |
COG category | [R] General function prediction only |
COG ID | [COG1242] Predicted Fe-S oxidoreductase |
TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA GAAAAACATG GGGAGACAAA AGGTATAATA CTTTAAATAG ATTTTTAAGA GAAAAGTTTG GAGAAAAAGT ATTTAAAATA AGTTTAGATG GTGGTTTTAC ATGTCCTAAT AGAGATGGTA AGGTTGCTAA GGGAGGATGT ACTTTTTGTA GTTCAAAGGG GTCAGGAGAT TATGCTGGAC AAAGAACTTT AAGTATTGGC ACTCAGTTTG ATAATGTTAA AGAGATGATG AATAAGAAGT GGAAAGAGGG AAAATATATA GCATATTTCC AAGCTTACAC TAATACATAT GCTCCTGTTG AAGAACTAAG AAGAAAATAT GAGGAAGCAA TTAATAAAGA AGGTGTAGTT GCTCTTGCTA TAGGTACAAG ACCAGATTGT ATAAATGAAG AAGTTTTAGA TTTATTAGAG GAAATGAATA AAAAGGTATA TACTTGGGTT GAGTTAGGAC TTCAAACAAT CCATGATGAT ACTGCTAGAA GTTTTAATAG AGGATATGAC TTAGAAGTAT TTGATAAGGC TATGGAAGGA TTAAAAAGTA GAGGGATAGA TACTGTAGTT CACTGTATAT TTGGACTTCC TGGAGAAAGT AAAGAGCAAA TGTTAGAAAC TGTTGATTAT GTTTCTAGAT GTGGAGCACA AGGAATAAAA TTACACTTGC TTCATCTAAT GGAAGGAACA AGAATGGTTA AGGATTATGA GGAAGGTAGA TTAAAATTCT TAACTCAAGA GGAATATGTT GATTTAATTT GTACGGCCAT AAGTAGAATA CCTCAAAATA TGGTTATACA TAGACTAACA GGAGATGCTC CTAGACAACT TCTTATAGGA CCTATGTGGA GTTTAAAAAA ATGGGAAGTT TTAAATGCTA TTGATAAGGC TCTTGAAGAT AATGATATTT ATCAAGGAAA GAATTTTGAA GAATAA
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Protein sequence | MEKRKTWGDK RYNTLNRFLR EKFGEKVFKI SLDGGFTCPN RDGKVAKGGC TFCSSKGSGD YAGQRTLSIG TQFDNVKEMM NKKWKEGKYI AYFQAYTNTY APVEELRRKY EEAINKEGVV ALAIGTRPDC INEEVLDLLE EMNKKVYTWV ELGLQTIHDD TARSFNRGYD LEVFDKAMEG LKSRGIDTVV HCIFGLPGES KEQMLETVDY VSRCGAQGIK LHLLHLMEGT RMVKDYEEGR LKFLTQEEYV DLICTAISRI PQNMVIHRLT GDAPRQLLIG PMWSLKKWEV LNAIDKALED NDIYQGKNFE E
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