Gene CPR_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2563 
Symbol 
ID4204780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2789211 
End bp2790146 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content32% 
IMG OID642567113 
Productradical SAM family protein 
Protein accessionYP_699810 
Protein GI110802237 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA GAAAAACATG GGGAGACAAA AGGTATAATA CTTTAAATAG ATTTTTAAGA 
GAAAAGTTTG GAGAAAAAGT ATTTAAAATA AGTTTAGATG GTGGTTTTAC ATGTCCTAAT
AGAGATGGTA AGGTTGCTAA GGGAGGATGT ACTTTTTGTA GTTCAAAGGG GTCAGGAGAT
TATGCTGGAC AAAGAACTTT AAGTATTGGC ACTCAGTTTG ATAATGTTAA AGAGATGATG
AATAAGAAGT GGAAAGAGGG AAAATATATA GCATATTTCC AAGCTTACAC TAATACATAT
GCTCCTGTTG AAGAACTAAG AAGAAAATAT GAGGAAGCAA TTAATAAAGA AGGTGTAGTT
GCTCTTGCTA TAGGTACAAG ACCAGATTGT ATAAATGAAG AAGTTTTAGA TTTATTAGAG
GAAATGAATA AAAAGGTATA TACTTGGGTT GAGTTAGGAC TTCAAACAAT CCATGATGAT
ACTGCTAGAA GTTTTAATAG AGGATATGAC TTAGAAGTAT TTGATAAGGC TATGGAAGGA
TTAAAAAGTA GAGGGATAGA TACTGTAGTT CACTGTATAT TTGGACTTCC TGGAGAAAGT
AAAGAGCAAA TGTTAGAAAC TGTTGATTAT GTTTCTAGAT GTGGAGCACA AGGAATAAAA
TTACACTTGC TTCATCTAAT GGAAGGAACA AGAATGGTTA AGGATTATGA GGAAGGTAGA
TTAAAATTCT TAACTCAAGA GGAATATGTT GATTTAATTT GTACGGCCAT AAGTAGAATA
CCTCAAAATA TGGTTATACA TAGACTAACA GGAGATGCTC CTAGACAACT TCTTATAGGA
CCTATGTGGA GTTTAAAAAA ATGGGAAGTT TTAAATGCTA TTGATAAGGC TCTTGAAGAT
AATGATATTT ATCAAGGAAA GAATTTTGAA GAATAA
 
Protein sequence
MEKRKTWGDK RYNTLNRFLR EKFGEKVFKI SLDGGFTCPN RDGKVAKGGC TFCSSKGSGD 
YAGQRTLSIG TQFDNVKEMM NKKWKEGKYI AYFQAYTNTY APVEELRRKY EEAINKEGVV
ALAIGTRPDC INEEVLDLLE EMNKKVYTWV ELGLQTIHDD TARSFNRGYD LEVFDKAMEG
LKSRGIDTVV HCIFGLPGES KEQMLETVDY VSRCGAQGIK LHLLHLMEGT RMVKDYEEGR
LKFLTQEEYV DLICTAISRI PQNMVIHRLT GDAPRQLLIG PMWSLKKWEV LNAIDKALED
NDIYQGKNFE E