Gene CPR_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2546 
Symbol 
ID4205479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2769865 
End bp2770557 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content30% 
IMG OID642567096 
Productmembrane protein 
Protein accessionYP_699793 
Protein GI110802194 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTT TAGCTTATTT TAATAGTGTC ATATCTAATA ATACATTTTT AGCCATAATA 
CTATCATTCT TTGCAGGAGT AGTAGCCTCT TTTAGTCCAT GTACCCTTTC ATCTATTCCA
TTATTAATAG GATATGTTCA AGGTAGTGAG ATTAAGGATA ATAAAAAAGC ATTTAAGTAT
TCACTGATAT TTTCAATTGG ACTTGGAATA ACATTTACTG TAATAGGCTT ACTTACAGCC
TTAATAGGAA AAGCCTTTTT AGGTGCAGGG AAGTTTTGGT ATATAATATT GGCTTTTATT
ATGATAGGAT CAGGGCTACA AGTTCTTGAT GTAATAAATT TATTTGGAGA TAAAAAAGAT
GCGTGTAAAA TCACTAAAAG AAGAGAGGGG ATTTTAGATG TCTTCTTTTT AGGAATATTA
AGTGGAATAT TAGCATCTCC TTGTGCAACA CCTATAATGG CAGCAATAAT AGTCTTTATA
GCTGCTAGTG GTAACTTAGT AATAGGAATG ATAATGCTTT TAATGTATTC ATTAGGTCAT
AGTGTTTTAA TAATTTTAGC TGGAACATCC TTTGGATTAG TTGAGAAAAT AGCCTACTCT
GAAAAGGGTA AAAAGACAGG AAGAGTATTA AAAAATATAT TAGGAACAAT TATAATATTA
GTTGGATTAT ACCTATTTTA TCTTGGAGTA TAG
 
Protein sequence
MEFLAYFNSV ISNNTFLAII LSFFAGVVAS FSPCTLSSIP LLIGYVQGSE IKDNKKAFKY 
SLIFSIGLGI TFTVIGLLTA LIGKAFLGAG KFWYIILAFI MIGSGLQVLD VINLFGDKKD
ACKITKRREG ILDVFFLGIL SGILASPCAT PIMAAIIVFI AASGNLVIGM IMLLMYSLGH
SVLIILAGTS FGLVEKIAYS EKGKKTGRVL KNILGTIIIL VGLYLFYLGV