Gene CPR_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2494 
Symbolpth 
ID4205347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2710278 
End bp2710844 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content28% 
IMG OID642567044 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_699741 
Protein GI110803012 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAA TAGTTGGATT AGGAAATCCG GGAAAACAAT ATGAGAAAAC TAGACATAAC 
ATTGGATTTG ATGTAATTGA TTATATGGCA AATAAGTATA ATATTGATGT AAATAGGGAA
AAATTTAAAG GTATTTGCGG TGAAGGATTT ATAGAAAATA AAAAAGTCAT TTTATTAAAA
CCTTTAACAT ATATGAATTT AAGTGGAGAA AGTATAAGAG AATTTGTTAA CTTTTATAAG
TTAGAAGATG ATGAAATAAT AGTAGTTTAT GATGATATAA GTTTAGATAT AGGAAGATTA
AGAATAAGAG AAAAAGGCAG TGCTGGTGGT CATAATGGAA TCAAGAGCAT AATACAAAAT
CTTGGCGGAG ATAAATTCCC AAGAGTTAAA GTTGGCGTAG GACAACCTAA AGATAACTTA
GTAAATCACG TTTTAGGAAA ATTCTCAAAG GAAGATAGGG AACATATAGA AAAGGTTATT
CCGGTAGTAA GTGATGCAAT AGTTGAAATT GTAAAAAATG ATGCTAAGGA ATCAATGAAT
AAATTTAATG GAGTTAATAT AGAATAG
 
Protein sequence
MILIVGLGNP GKQYEKTRHN IGFDVIDYMA NKYNIDVNRE KFKGICGEGF IENKKVILLK 
PLTYMNLSGE SIREFVNFYK LEDDEIIVVY DDISLDIGRL RIREKGSAGG HNGIKSIIQN
LGGDKFPRVK VGVGQPKDNL VNHVLGKFSK EDREHIEKVI PVVSDAIVEI VKNDAKESMN
KFNGVNIE