Gene CPR_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2488 
Symbolhup 
ID4205357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2701170 
End bp2701445 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content33% 
IMG OID642567038 
ProductDNA-binding protein HU 
Protein accessionYP_699735 
Protein GI110803022 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.05619e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAG CAGAATTAAT AACAAGCATG GCTGAAAAAA GCAACTTAAC TAAAAAAGAT 
GCTGAATTAG CTTTAAAAGC ATTCATAGAA AGCGTTAGCG AAACTTTAGA AAATGGTGAC
AAAGTTCAAT TAGTTGGATT TGGAACTTTC GAAACTAGAG TGAGAGCTGA AAGAGAAGGA
AGAAACCCAA GAACTAAAGA AGTTATAAAA ATACCTGCTT CAATAGCTCC TGTATTCAAG
CCAGGTAAAG AGTTAAAAGA AAGAGTTAAC GCTTAA
 
Protein sequence
MNKAELITSM AEKSNLTKKD AELALKAFIE SVSETLENGD KVQLVGFGTF ETRVRAEREG 
RNPRTKEVIK IPASIAPVFK PGKELKERVN A