| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2475 |
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| Symbol | |
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| ID | 4204478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2695434 |
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| End bp | 2697824 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642567025 |
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| Product | stage II sprulation protein E, putative |
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| Protein accession | YP_699729 |
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| Protein GI | 110802462 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.461942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATG GAGTTAAATT TGATAATTAC AAAAGAATAA AGGGTTCAGA AAATGTGAAA
AATAATATGA AAATAGAAGC TTCAAGTATT GGTCTTATTA TGGCTGTATT TGTAGGTTTT
TTAATAAGCA GAGTGTATTT AGATATGACT TTTGGAGTAG TTCAAGTATT AGCCCCATTT
GGATTAGCAT ATTTAATTGC AATAACGAAT TATGAAAGAA AATATATATT ATCATCAAGC
TTGGGAGTTA TATTAGGGTA TATTACCTTG TTTAATAAGG TTAGCAACTT TTCGGCTTAC
ATAATAATAT CAACTATAGT TACCATAATT TCTATGAGTA AACTAAATAA AAAGGCTAGA
AATATAGCAA GTTTTATAAT GGTATTTATA GGATTATTTA TTTACGGAGT TTTAGCAGGA
AGTTCGGATA TAATTTTACA CTTAATAGGA GCTATTTCAG TAACAGCATT AGTTTTTCCT
ATATATTATA TTGTGAGCTA TACTTTAAAG TGCATAGAGG AAATAAATAC TCAACATTTT
TTCTTGATAG ATGAAATTGT AAGTATAGAA TTATTTATAT GTTTATTAAT AGTTGGAATT
GGAACCATAT CAATAAATGA TATTAGTTTT AGAAATATAA TAGCTATACT TTTTATTATA
GCTTTAGCAT TTATTTCAGA TACTAATATG GGGGCTGGAG CAGGTATAAC TATGGGTATA
ATATTAGGAT TTGCTACAGG AAATCTTATG GAGAGCATAG CCATTTATGG AGCTTGTGGT
TTAGTTGCAG GCATATTTAG AGAGTCAGGA AAGCTTTTTA CAGCCTTATC ATTTAACATA
ATTTTTATAA TAGTAACTTT ATATTCTGGA GTTTTTAATA ATATTTCATT TGTAGAAACT
TTAGTTGGAA CAGTAATTTT TCTTTTAATT CCTAAAAAAA TATACAATAA AATTTCTTTA
GAGATAAACA AGGATAAAAA GGTTGGTCAT TTTAGTGAAG TTAGATTTTC TGAGATTAAA
GATGAGTTAA CTGAAAGATT AAAAGATTTT ACTGAAGTTT TATCTGTAAT GGGTAAATCA
TTAAATAATC TAGTTAGTAA TGATAAATTA GCTATAAAAA ATAAGGGGAA TGCATTGGTT
GAAAATTTAT CAGATAGAAC TTGTAGTGAT TGTGATATGA GATATATGTG TTGGAAGAGA
GAACTTCATC AAACTTATAA TGCTTTTTCA GATTTAATAA GAAATTATGA AAATAATTTG
GGTGATTTTC CTCATGAACT TGAGAAAAAG TGCATAAAGA AATATGCTCT AGTTAAAAAT
TTAGAGGACA TAATGAATAT CTATATGGTA AATGAAACTT TAAAGAGTAG ATTAGGAGAG
GGAAGAAAAA TCTTATCTAA TCATATAAAT AATATGTCAG TTACAATTAG TGAGATAGTT
GACGAGTTTG GAAATGAACT ACATCTATGT ACTGATGTGG AGAAAAGTAT AAAAAAATCT
CTTTTAAAGT ATGGCGTTAA CTTTGGAAGC TTAATATGTT ATAACGATAA AAATGGAAGA
ATTAAAATTA AGATGCAAAT GGAAAATTGT ATGGGATCTC AAACATGCAT AAAAACAGTT
CTTCCTATAA TAAGTGAGAC CATAGGGAAA AATATGAGTA TTGGAAGTGA AGGGTGTAAT
ATAAATAGCA AAAATAATAT GTGTGAGATC GTTGTTGAAG AAGCTCCTAA ATATCATATT
AATTCCCATG TAGCAGTTGC TACTAAAGAG GGAGAAAAAT TCACTGGAGA TTCATATTCA
TATGGTAGAA CAAAGGATGG TAATTATATA ACTGTAATAT CAGATGGTAT GGGATCAGGC
CCTGAAGCAG GACTTGAAAG TAAAGTCTCA GTAGAAATAA TAGAAAAATT TATGGATGTT
GGTTTTGATG AAAAAATAGC TATTGATGCA GTTAATGCAA TTATGAGTAT AAAGTTTAGT
GAAGATGAAA AGTTTTCTAC ATTAGATATG AGTAAGATAG ACTTATATAC TGGAAATGCT
AAGTTTATGA AAGTTGGAGC TATAGAAAGT TTTATAAAGA GAGGAAATAA GGTGGAGGTT
ATAAATTCAA ATACACTTCC TTTTGGTGTC TTAGAAGAAC CAGATGTAGA CACTGTTGAA
AAGCAAGTAA GTAATGGGGA TGTAATAGTT AGTATAAGTG ATGGTATTTT AGATGTTAAA
AATGATGGAA GTTTTGATAC TACATGGTTA ATTGAATTTT TAAAGAATAC TAAGTATAGA
CAGCCTAAGG ATTTATCAAT AGCTATTTTA GAAAAAGCAA AGGAATTAAG TGGAGGAAAG
GCTAAGGATG ATATGACAGT GGTTGTATCT AAGGTTTTTG CAATAAATTA A
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| Protein sequence | MQYGVKFDNY KRIKGSENVK NNMKIEASSI GLIMAVFVGF LISRVYLDMT FGVVQVLAPF
GLAYLIAITN YERKYILSSS LGVILGYITL FNKVSNFSAY IIISTIVTII SMSKLNKKAR
NIASFIMVFI GLFIYGVLAG SSDIILHLIG AISVTALVFP IYYIVSYTLK CIEEINTQHF
FLIDEIVSIE LFICLLIVGI GTISINDISF RNIIAILFII ALAFISDTNM GAGAGITMGI
ILGFATGNLM ESIAIYGACG LVAGIFRESG KLFTALSFNI IFIIVTLYSG VFNNISFVET
LVGTVIFLLI PKKIYNKISL EINKDKKVGH FSEVRFSEIK DELTERLKDF TEVLSVMGKS
LNNLVSNDKL AIKNKGNALV ENLSDRTCSD CDMRYMCWKR ELHQTYNAFS DLIRNYENNL
GDFPHELEKK CIKKYALVKN LEDIMNIYMV NETLKSRLGE GRKILSNHIN NMSVTISEIV
DEFGNELHLC TDVEKSIKKS LLKYGVNFGS LICYNDKNGR IKIKMQMENC MGSQTCIKTV
LPIISETIGK NMSIGSEGCN INSKNNMCEI VVEEAPKYHI NSHVAVATKE GEKFTGDSYS
YGRTKDGNYI TVISDGMGSG PEAGLESKVS VEIIEKFMDV GFDEKIAIDA VNAIMSIKFS
EDEKFSTLDM SKIDLYTGNA KFMKVGAIES FIKRGNKVEV INSNTLPFGV LEEPDVDTVE
KQVSNGDVIV SISDGILDVK NDGSFDTTWL IEFLKNTKYR QPKDLSIAIL EKAKELSGGK
AKDDMTVVVS KVFAIN
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