Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2474 |
Symbol | tilS |
ID | 4204566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2693810 |
End bp | 2695219 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642567024 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_699728 |
Protein GI | 110802414 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAA AGGTTATAGA TTTTATAAAG GAAAACTCCA TGATTAAAAG TGGAGATAAG GTTTTGGTAG CTTTATCAGG TGGTCCAGAC TCAGTATGTT TATTACATAT TCTAAGTGAG CTTAAGGAAT TATTACACAT AGAAGTATAT GCAGCCCATG TGAATCATTG TTTAAGAGGA GAAAGTGCTT TAAAAGATGA AGCTTATGTG GAAGAACTTT GTAAAAATTT AAATATAAAA TGTTTTGTAA AAAGAGTAGA TATAAATAAG ATAAGTGAAG AACAAAACAT TTCTACAGAA ATGGCTGGAA GAGAAGAGAG ATATAAATTC TTTGAAGAAC TAAAAAATGA ATATTCACTA GATAAAATAG CTATAGCACA CAATGCTAAT GATCAAGCAG AAACTCTTAT TATGAGAGCT TTAAGAGGAA CTGGCATAGA AGGATTAGTC GGAATTAAAC CAGTTAGAGA TGGTATTTTC ATAAGACCTA TATTGATTTT AAGAAGAAAA GAAATAGAAG AATACTGTGA AATAAATAAT TTAACTCCTA GAATAGATGA AACTAATTTA GAAGAAATAT ATTCTAGAAA TAAAATAAGG CTTAAGGCAA TACCATTTAT AGAAGAGAAT TTTAATCCAG ATATAGTTAA TACTTTAAAT AGATTAGCTT ATAGCTGTAG TAAGGATGTA GAGTTTATAC AAGAAGAAGT AGAAAAGAGA TTTACTAAAC TTTGTATAAA AGAAAATAAC AGCATTCTTA TTAAAGAAGA AGCCTTTAAT GCAAAGGAAG CTCTATTAAC AAGAATAATA AAAAAGGCAT TATTTGAAGT GAGTTCTAAA CATAATAATT TTGAATTAAA ACATATACAG GATATAATTG CCTTAAAAGA TAAAGGGACA GGAAAGCAAA TTAACATAAC TAACGGGGTA ATTGCTTTAA ATGAATATGG AGATATAAGA ATAAAATTAG TAGATAGCAA AAAGGTTAAA GATAATAAAG TTTTAAATTT AGAAAATATT AAAGATGAAC TAGATAAAAA TCAAAAAGTT GTAATAGAAG ATGATATTTT AGGAAATTAT GAATTAATAG TAGAAGATTT AAAAAAAGGT GAAAAATTTT CAAAAGATAG ATTTATAAAG TCTTTTGATT ATGATAAAAT TTCCAATATA GATATTAGAT TTAGACAAAA TGGAGATAAA ATAATTCCTT TAGGAATGAA GAGTAGTAAA AAGCTAAAAG ATATATTTAT AAATAATAAA ATACCTAAAG AAGAAAGAGA TTTTATACCC TTAGTGCTAT TTAATAATGA AATAGCATGG ATTGTAGGAT CTAATGTTAG TGAAACATTT AAAGTCACAA ATAAAACTAA AAAGGTAATT AAAATTACTT TTAAAGGAAA GGAAAATTAA
|
Protein sequence | MKKKVIDFIK ENSMIKSGDK VLVALSGGPD SVCLLHILSE LKELLHIEVY AAHVNHCLRG ESALKDEAYV EELCKNLNIK CFVKRVDINK ISEEQNISTE MAGREERYKF FEELKNEYSL DKIAIAHNAN DQAETLIMRA LRGTGIEGLV GIKPVRDGIF IRPILILRRK EIEEYCEINN LTPRIDETNL EEIYSRNKIR LKAIPFIEEN FNPDIVNTLN RLAYSCSKDV EFIQEEVEKR FTKLCIKENN SILIKEEAFN AKEALLTRII KKALFEVSSK HNNFELKHIQ DIIALKDKGT GKQINITNGV IALNEYGDIR IKLVDSKKVK DNKVLNLENI KDELDKNQKV VIEDDILGNY ELIVEDLKKG EKFSKDRFIK SFDYDKISNI DIRFRQNGDK IIPLGMKSSK KLKDIFINNK IPKEERDFIP LVLFNNEIAW IVGSNVSETF KVTNKTKKVI KITFKGKEN
|
| |