Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2472 |
Symbol | |
ID | 4205012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2691376 |
End bp | 2693181 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642567022 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_699726 |
Protein GI | 110803261 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TACAAAGTAT GATTACTTAT ATAGCTATTT TTGCTGTAGT GCTTATGTTT GCATTTGCTT TTTATAGAAA TGGAACTCAA GGAAAAGTAA TATCATATAC TGAATTTAAA GAAGCATATG TAGGAAATAA AATTGAAACA ATGACCATAA AAGAAGATAA AATGTCAGTT GATGGGGTTT TTAAAGATGG TAAGAGGTTT ACTTCATATG TTTCAAATAA TATGTTAGAC AATCTTTTGC AAGAGACTAA AGGGGTAGAA ACTGTAATAA AGTATACTCC GCCTAATAAT ATGGGTATTT GGATTAGTTT CCTTCCAACA ATACTTATAA TAGGTGTGAT ATTCTTTGGT TTATTTATGT TCACACAGCA AGCTCAAAAC AGTGGTGGAA ATAGAGGGGT AATGAATTTC GGTAAAAGTA AAGCTAAGAT GGCTAATTTA GACGGAAAAA AAGTTACGTT CAAAGATGTC GCTGGAGCTG ATGAAGAAAA AGGTGAATTA GAAGAAATTG TTGATTTCTT AAAACAACCT AAGAGATATA TAGAAATGGG AGCAAGAATA CCTAAAGGAG TTCTTTTAGT AGGGCCTCCA GGAACAGGTA AGACACTTCT TGCAAAAGCT ATAGCAGGAG AAGCTGGTGT TCCTTTCTTT AGTATATCAG GTTCAGATTT CGTTGAAATG TTTGTTGGAG TTGGTGCTTC AAGAGTAAGA GATTTATTTG AGCAAGCTAA GAAAAATGCT CCATGTATTA TATTCATAGA CGAAATCGAT GCTGTTGGTA GACAAAGAGG TGCTGGACTT GGTGGCGGTC ATGATGAGAG AGAACAAACA TTAAACCAAT TACTAGTTGA AATGGACGGT TTTGGAGTTA ATGAAGGAAT AATTATGATA GCTGCTACAA ATAGACCAGA TATCTTAGAT CCAGCATTAC TAAGACCAGG AAGATTTGAT AGAAGAATTT TAGTAGGTGC ACCTGATGTT AAGGGTAGAG AAGAAGTACT AAAAGTTCAT ACAAGAAATA AACATCTATC AGAAGATGTA GATTTAAAAG TTTTAGCTAA AATGACACCA GGATTTAGTG GTGCAGATCT TGAAAACTTA ACTAACGAAG CTGCATTATT AGCGGTTAGA GGTGGTAAAA GTAGCATAGA TATGTCAGAC ATTGAAGAGG CTATAACAAG AGTGATAGCT GGGCCAGAGA AGAAGAGTAG AGTTGTTAGT GAATATGATA GAAGAATCAC TGCAGTTCAC GAATCTGGAC ACGCTGTTGT AAGTAATGTT CTAGAGTATG CAGATCCAGT TCATGAAATA AGTATAATTC AAAGAGGAAT GGCTGCAGGA TACACAATGA ATTTACCAGA GGAAGATAGA ACTCACACAT CTAAGAAACA ACTTAAAGAT AAGATGGTTG AACTTTTAGG TGGAAGAGTG GCTGAGAAAT TAGTTATTGG AGATATAAGT GCCGGTGCTA AAAACGATAT AGATAGAGCT AGTCACATTG CTAGAAGTAT GGTTATGGAA TATGGAATGA GTGATGTTAT TGGACCTATA TCATTTGGTA ATAGCGATGG TGGCGAAGTA TTCTTAGGTA GAGACATTGG AAAGAGTAGT AACATAAGTG AAGAAACTAG CGCTAAAATA GATGAAGAAA TCAAGAAATT AATTGATGAA GCTTATAATA GAGCAGAATC TATATTAAGA GAAAATATAA GTAAATTAAA TGCAGTAACT GATGTGTTAC TTCAAAAAGA AAAAATTGAT GGTGATGAGT TTAGAGAAAT ATTTAAAAAC TCATAG
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Protein sequence | MKKLQSMITY IAIFAVVLMF AFAFYRNGTQ GKVISYTEFK EAYVGNKIET MTIKEDKMSV DGVFKDGKRF TSYVSNNMLD NLLQETKGVE TVIKYTPPNN MGIWISFLPT ILIIGVIFFG LFMFTQQAQN SGGNRGVMNF GKSKAKMANL DGKKVTFKDV AGADEEKGEL EEIVDFLKQP KRYIEMGARI PKGVLLVGPP GTGKTLLAKA IAGEAGVPFF SISGSDFVEM FVGVGASRVR DLFEQAKKNA PCIIFIDEID AVGRQRGAGL GGGHDEREQT LNQLLVEMDG FGVNEGIIMI AATNRPDILD PALLRPGRFD RRILVGAPDV KGREEVLKVH TRNKHLSEDV DLKVLAKMTP GFSGADLENL TNEAALLAVR GGKSSIDMSD IEEAITRVIA GPEKKSRVVS EYDRRITAVH ESGHAVVSNV LEYADPVHEI SIIQRGMAAG YTMNLPEEDR THTSKKQLKD KMVELLGGRV AEKLVIGDIS AGAKNDIDRA SHIARSMVME YGMSDVIGPI SFGNSDGGEV FLGRDIGKSS NISEETSAKI DEEIKKLIDE AYNRAESILR ENISKLNAVT DVLLQKEKID GDEFREIFKN S
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