Gene CPR_2468 details

Gene Information

• Locus tag: CPR_2468
• Symbol: greA
• ID: 4204973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2686781
• End bp: 2687257
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642567018
• Product: transcription elongation factor GreA
• Protein accession: YP_699722
• Protein GI: 110802874
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAA AGAAACATAT AATGACATAT GAAGGTGTTA AAAAATTAGA AGATGAATTA 
GAATATCTTA AAACAGTAAA AAGAAAAGAA ATAACTGAAA AGATAAAAGT TGCTTTAGGA 
TACGGAGATT TAAGTGAGAA CTCAGAATAT GATGAAGCTA AAAATGAGCA AGCTTTCACT 
GAAGGAAGAA TAATTCAATT AGAAAACATG CTTAAAAATG CTGTTGTTGT TGATGAGTCA 
GAAATATCAA CAGATATAGT TACAGTTGGA TCAATCGTTA AGGTTATGGA CTTTGATTTT 
GATGAAGAAG TTGAGTATTC AATAGTTGGT TCAGCAGAAG CAGATCCAAT GAACTTTAAG 
ATATCAAATG AATCACCAGT TGGTGAAGGG TTAATGGGTA AAAAAGTTGG AGATGTTGTA 
GAGATAGAAG TACCAGGAGG AACTACTAAG TTCGAAGTTC TTGGAATAAG AAGATAG 

 

Protein sequence

MSEKKHIMTY EGVKKLEDEL EYLKTVKRKE ITEKIKVALG YGDLSENSEY DEAKNEQAFT 
EGRIIQLENM LKNAVVVDES EISTDIVTVG SIVKVMDFDF DEEVEYSIVG SAEADPMNFK 
ISNESPVGEG LMGKKVGDVV EIEVPGGTTK FEVLGIRR