Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2440 |
Symbol | |
ID | 4204913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2658471 |
End bp | 2658926 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566988 |
Product | transcriptional repressor |
Protein accession | YP_699702 |
Protein GI | 110801962 |
COG category | [K] Transcription |
COG ID | [COG4463] Transcriptional repressor of class III stress genes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAT TGTCAGATTC AATAGAATAT TTTCTAAAGG ATTTATTAGA TAAAACAGAA GATAACAATT TAACGATAAG AAGAAATGAG TTAGCTGATA AGTTTAAGTG TGCACCATCA CAGATAAATT ATGTTTTAAC AACTAGATTT ACCTATGAAA AAGGTTATTT AATTGAAAGT AGAAGAGGTG GTGGTGGATA CATTGTAATA AAAAAAGTAA TTCATGAAGT TCATGCTGAT AGAAGAGATT TAATTTATGA TGAGATAGGC ACAGGGATTA CATATCATAA TGCAGCTGCC ATTGTAGATA ATTTACTTGA ACATAATATA ATAGATGAAA AAACAGCAAA TATTACTAAG GTAGCAATAA ATGATAGAAC CCTTCAGAGT TCTAAGAATA TAAACGAAAC AAGAGCAGAT ATTTTTAAGG CTTTGCTTAT GGTATTACTT AAGTAA
|
Protein sequence | MAKLSDSIEY FLKDLLDKTE DNNLTIRRNE LADKFKCAPS QINYVLTTRF TYEKGYLIES RRGGGGYIVI KKVIHEVHAD RRDLIYDEIG TGITYHNAAA IVDNLLEHNI IDEKTANITK VAINDRTLQS SKNINETRAD IFKALLMVLL K
|
| |