| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2436 |
|---|
| Symbol | trxB |
|---|
| ID | 4204335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2653245 |
|---|
| End bp | 2654183 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642566984 |
|---|
| Product | thioredoxin-disulfide reductase |
|---|
| Protein accession | YP_699698 |
|---|
| Protein GI | 110801661 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAG AAATAAAAGA ATTAGATTTA ATAATAATTG GAGCCGGGCC AGCAGGATTA
ACATCTGCAA TATATGCTTC AAGAGCAAAA TTAAGTACTT TAGTTCTAGA AGATAATTTA
GTTGGGGGTC AAGTAAGATC AACTTATACA GTTGAAAACT ATCCTGGGTT TACAGAAATA
ACAGGAAATG ACCTTGCAGA TAGAATACAA GCGCAAGCAG AGGCTTGTGG AGCTATAATA
GATGAATTTG ATTTTATAGA AAATGTCTCA TTAAAAGATG ATGAAAAAAT CATAGAGACT
GGAGATTATA TATATAAGCC AAAGGCTGTA ATAATAGCTA CAGGAGCTAC ACCTAAGAAG
TTACCAATTC CAAGTGAAAG TAAATATCTA GGTAAGGGTG TGCATTACTG TGCAGTATGT
GATGGAGCAG TTTACCAAGA TGAGGTTGTT GCCGTTGTAG GTGGCGGAAA TGCTGCTTTA
GAAGAAGCTT TATATCTATC TAATATAGTT AAGAAAGTAA TTGTTATAAG AAGATATGAT
TATTTCCGTG CAGAAGCTAA GACATTAGAG GCTGCAAGCA ATAAGGAAAA TATTGAAATA
ATGTATAACT GGGATTTAGT TGATGTTCTA GGTGGAGAGT TTGTTGAAGC TGCAAGAATA
AAAAATACTA AAACTGGAGA AGAAAAAGAA ATTGCTATAA ATGGAGTCTT TGGATATATA
GGAACAGAAC CTAAGACATC TATGTTTAGA GAATATATAA ATGTTAAAGA AAATGGTTAT
ATTGAAGGCG ATGAAAACAT GAGAACTAAT GTTAAGGGTG TTTATGTAGC GGGAGATGTT
AGAGAAAAAA TGTTTAGACA AATAACTACT GCCGTTTCAG ATGGAACTAT AGCAGCCTTA
CATGCAGAAA AATATATTTC AGAAATAAAG GAGAGATAA
|
|---|
| Protein sequence | MDKEIKELDL IIIGAGPAGL TSAIYASRAK LSTLVLEDNL VGGQVRSTYT VENYPGFTEI
TGNDLADRIQ AQAEACGAII DEFDFIENVS LKDDEKIIET GDYIYKPKAV IIATGATPKK
LPIPSESKYL GKGVHYCAVC DGAVYQDEVV AVVGGGNAAL EEALYLSNIV KKVIVIRRYD
YFRAEAKTLE AASNKENIEI MYNWDLVDVL GGEFVEAARI KNTKTGEEKE IAINGVFGYI
GTEPKTSMFR EYINVKENGY IEGDENMRTN VKGVYVAGDV REKMFRQITT AVSDGTIAAL
HAEKYISEIK ER
|
|---|
| |