| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2429 |
|---|
| Symbol | |
|---|
| ID | 4205522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2646594 |
|---|
| End bp | 2647658 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642566977 |
|---|
| Product | DNA integrity scanning protein DisA |
|---|
| Protein accession | YP_699691 |
|---|
| Protein GI | 110802645 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTG TACATGATGA TGAGTTAAAA AAAATATTAA AAATAATGAG TCCAGGTACT
TCTTTAAGAG AAGGATTAGA TAATATACTT AGAGCTAAAA CAGGAGGACT TATAGTATTA
GGGGATAATG AAGAAATATT AGATTTAGTA GATGGTGGAT TTAATATAAA TTCTGAATAT
AGTCCAGCAT ATATATATGA GCTTGCTAAG ATGGATGGGG CATTAGTACT TACTTCAGAC
AGAAAAAGAA TACTCTACGC AAATGCTCAG CTTATGCCAA ATCAATCTAT AAGTACTTTT
GAAACAGGAA CAAGACATAG AACTGCTCAA AGGGTTGCAA AGCAAACAAA TAAAATAGCA
ATAGCTATAT CACAAAGAAG AAATATAATT ACTGTTTATA AAGGTGACAT AAAATACGTT
TTAAGGGATA GTGCAGTTAT ATTAAGTAAA GCAAATCAAG CTATACAAAC ATTAGAGAAG
TATGTAGCTG TACTTGAAAG AGTAACAAAT AATCTTAACA TACTTGAGTT TCAAGACCTA
GCAACTCTTT TTGATGTAAC TACAGCTATA CAGAGAACTG AAATGGTAAT GAGAATAGTT
GAAGAGATAG AGGGTTACAT TATTGAGTTA GGAAATGAGG GAAGACTTAT TTCTATGCAA
TTAAATGAAT TAGTAAGAAG TATAGAACAA GATGGAGTAC TTTTAATAAG AGATTATTGC
TATGACAAGA TGGAATATAA TGATGTCTAC AAAGAAATTC AAGAGTTATC GGCTGAAGAT
TTATTAGATT TAGATATAAT AGCAAAAGAA TTGGGATATG TAGGAAAATC TTTAATTGAC
ACATTAGTGT CACCAAGAGG GTATAGAATA TCAAGTAAGA TACCAAGAAT ACCTTCAAAT
GTAATAGAAA ACTTAGTAGG ACATTTTGGA AAGCTTAAAT ATATTCTTGA AGCTGGAAAT
GAAGAATTAG ATCAAGTAGA GGGAATTGGA GAAGCTAGAG CTAGAGCGAT AAAAAATGGA
TTAAGAAGAA TACGAGAACA AGTTGCTTTA AATAAAAATT TATAA
|
|---|
| Protein sequence | MRTVHDDELK KILKIMSPGT SLREGLDNIL RAKTGGLIVL GDNEEILDLV DGGFNINSEY
SPAYIYELAK MDGALVLTSD RKRILYANAQ LMPNQSISTF ETGTRHRTAQ RVAKQTNKIA
IAISQRRNII TVYKGDIKYV LRDSAVILSK ANQAIQTLEK YVAVLERVTN NLNILEFQDL
ATLFDVTTAI QRTEMVMRIV EEIEGYIIEL GNEGRLISMQ LNELVRSIEQ DGVLLIRDYC
YDKMEYNDVY KEIQELSAED LLDLDIIAKE LGYVGKSLID TLVSPRGYRI SSKIPRIPSN
VIENLVGHFG KLKYILEAGN EELDQVEGIG EARARAIKNG LRRIREQVAL NKNL
|
|---|
| |