| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2405 |
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| Symbol | rpsL |
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| ID | 4205551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2623557 |
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| End bp | 2623937 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642566953 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_699668 |
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| Protein GI | 110802980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000879391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACTA TAAGCCAATT AGTAAGAAAA GGCAGAAAAA CAGTAGCATC AAAATCAACT
GCACCAGCTC TTAAAGAGTG TCCACAAAAA AGAGGAGTTT GTACTGTAGT TAAAACAACT
ACTCCTAAGA AACCTAACTC AGCGTTAAGA AAAATCGCCA GAGTAAGATT AACTAATGGA
TACGAAGTAA CAGCTTACAT TCCTGGTGTA GGCCACAACT TACAAGAGCA TAGTGTTGTT
CTTATAAGAG GTGGAAGAGT TAAAGACCTT CCTGGTGTTA GATACCACAT AGTAAGAGGA
GCTTTAGACT CAGCTGGAGT AGCTAACAGA ATGCAAGGAA GATCAAAGTA CGGTGCTAAG
AAACCAAAGC AAAAGAAATA A
|
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| Protein sequence | MPTISQLVRK GRKTVASKST APALKECPQK RGVCTVVKTT TPKKPNSALR KIARVRLTNG
YEVTAYIPGV GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG ALDSAGVANR MQGRSKYGAK
KPKQKK
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