Gene CPR_2399 details

Gene Information

• Locus tag: CPR_2399
• Symbol: rplC
• ID: 4205385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2616635
• End bp: 2617264
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642566948
• Product: 50S ribosomal protein L3
• Protein accession: YP_699663
• Protein GI: 110802837
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000824684
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CTATAATAGG TAAAAAAGTT GGAATGACTC AAATATTCGA TGAGAATGGT 
AGAGTAATCC CTGTAACTGT AGTTGAAGCT GGTCCATGTG TTGTAGTTCA AAAGAAAACA 
GTTGAAACTG ATGGATATGA CGCAATACAA GTTGGATTCG GTGAATTAAG AGAAAAATTA 
GTTAACAAAC CAAGAAGAGG ACATTTTGCT AAAGCAGGTG TTTCTTTAAG AAGAACTTTA 
AAAGAGTTCA GAATGGAAGA TGTTGCTAAT TACAATGTTG GAGACGAAAT AAAGGTTGAC 
ACATTTGAAA TTGGAGACAA AGTAGACGTA TCAGGAGTTT CTAAAGGTAA GGGATTCCAA 
GGTACAATCA AAAGATGGAA TGCTAGTAGA GGACCAATGT CTCACGGTTC TAAATTCCAC 
AGAGCACCAG GTTCAATGGG AGCTGCTTCA GACCCATCAA GAACTTTCAA GAACAAAAGA 
ATGCCTGGAC ATATGGGAGC TAAGAACACA ACTGTTCTTA ACTTAGAAGT TGTTAAGATA 
ATGCCTGAAA AGAACATCAT CTTAATCAAG GGGGGAATCC CAGGTCCAAA TAAAGGCACA 
ATAGTTATAA GAAACAGCGT TAAGGCTTAA 

 

Protein sequence

MKKAIIGKKV GMTQIFDENG RVIPVTVVEA GPCVVVQKKT VETDGYDAIQ VGFGELREKL 
VNKPRRGHFA KAGVSLRRTL KEFRMEDVAN YNVGDEIKVD TFEIGDKVDV SGVSKGKGFQ 
GTIKRWNASR GPMSHGSKFH RAPGSMGAAS DPSRTFKNKR MPGHMGAKNT TVLNLEVVKI 
MPEKNIILIK GGIPGPNKGT IVIRNSVKA