Gene CPR_2384 details

Gene Information

• Locus tag: CPR_2384
• Symbol: rplF
• ID: 4204057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2609892
• End bp: 2610431
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642566933
• Product: 50S ribosomal protein L6
• Protein accession: YP_699648
• Protein GI: 110801640
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAG TAGGTAAAAT GCCTATAGCT ATCCCTGCTG GAGTAACTGT TACTGTAACA 
CCAGAGAACG TTGTTACAGT AAAAGGCCCT AAGGGTGAGT TAGTTAAAGC TATGCACAAA 
GACATTAATA TAGCTGTAGA AGATGCTCAA GTAGTTGTTA CTAGACCAAG TGACGTTAAA 
GAACACAGAG CACTTCACGG ATTAACTAGA GCTTTACTTA ACAACATGGT TGTTGGAGTA 
AGCCAAGGTT TTTCAAAAAC TTTAGAGTTA AACGGAGTTG GATACAGAGC TCAATTACAA 
GGAAAGAAAC TTGTTATGAA CTTAGGATAT TCACATCCAG TAGAAGTTGA AGCAGTTGAT 
GGAGTAGACT TCAAATTAGA CGGAACAACT AAAGTTATCG TTGAAGGTAT CGATAAAGAA 
AAAGTTGGAG CAGTTGCTGC TAACATCAGA TCATGGAGAA AACCTGAACC ATATAAAGGT 
AAAGGAATCA AGTACTCTGA TGAAGTTATA AGAAGAAAAG AAGGTAAAAC TGGTAAATAA 

 

Protein sequence

MSRVGKMPIA IPAGVTVTVT PENVVTVKGP KGELVKAMHK DINIAVEDAQ VVVTRPSDVK 
EHRALHGLTR ALLNNMVVGV SQGFSKTLEL NGVGYRAQLQ GKKLVMNLGY SHPVEVEAVD 
GVDFKLDGTT KVIVEGIDKE KVGAVAANIR SWRKPEPYKG KGIKYSDEVI RRKEGKTGK