Gene CPR_2380 details

Gene Information

• Locus tag: CPR_2380
• Symbol: rplO
• ID: 4205654
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2608325
• End bp: 2608765
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642566929
• Product: 50S ribosomal protein L15
• Protein accession: YP_699644
• Protein GI: 110802542
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTC ATGAATTAAG ACCAGCAGCT GGTAGTAAAT CAGCTCCAAA AAGAGTTGGT 
AGAGGTACTG GTTCAGGCTT AGGAAGAAAT GCCGGAAAAG GTGAAAAGGG TCAAAATGCT 
AGATCAGGTG GTGGAGTTAG ACCTGGATTC GAAGGTGGTC AAATGCCATT ATACAGAAGA 
CTTCCTAAAA GAGGATTCAC TAATCCATTT ACAAAACATT TTGTAACAAT CAATGTTGAT 
AGATTAAACA TATTCGATAA TGGAACAGAA GTTACTCCAG AATTACTATT AGAAAGAAGA 
GTAGTAAGTA AACTAATGGA CGGAGTTAAG ATCTTAGGAA ATGGAAACAT AGAAAAGAGC 
TTAACTATCG CAGGTTGCAA GTTATCAAAG CAAGCAGCTG AAAAAATAGT TGCAGCTGGA 
GGAAAAGTTG AGGTGAAATA A 

 

Protein sequence

MKLHELRPAA GSKSAPKRVG RGTGSGLGRN AGKGEKGQNA RSGGGVRPGF EGGQMPLYRR 
LPKRGFTNPF TKHFVTINVD RLNIFDNGTE VTPELLLERR VVSKLMDGVK ILGNGNIEKS 
LTIAGCKLSK QAAEKIVAAG GKVEVK